Difference between revisions of "Guanine26-in-tRNA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** beta-glucosidase-lik...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ORF
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** photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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** beta-glucosidase-like_chloroplastic
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** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
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** beta_glucosidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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* Synonym(s):
 
* Synonym(s):
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** photosynthetic 3-hydroxybutyrate biosynthesis (engineered)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''10''' reactions in the full pathway
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** 1 [[CPD-11641]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-182]][c] '''+''' 1 [[Glucopyranose]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 4-methylumbelliferyl glucoside[c] '''+''' 1 H2O[c] '''=>''' 1 4-methylumbelliferone[c] '''+''' 1 D-glucopyranose[c]
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*** [[Tiso_gene_14718]]
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*** [[Tiso_gene_8720]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5619]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_13317]]
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* [[Tiso_gene_6187]]
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** 7 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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* [[Tiso_gene_8669]]
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*** [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* [[3PGAREARR-RXN]]
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***EC-NUMBER
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** 16 associated gene(s):
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* [[Tiso_gene_6497]]
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*** [[Tiso_gene_2667]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_9922]]
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* [[Tiso_gene_15067]]
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*** [[Tiso_gene_15048]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_2841]]
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***EC-NUMBER
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*** [[Tiso_gene_14530]]
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* [[Tiso_gene_2344]]
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*** [[Tiso_gene_16754]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_2365]]
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* [[Tiso_gene_2843]]
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*** [[Tiso_gene_16271]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_5468]]
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* [[Tiso_gene_13306]]
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*** [[Tiso_gene_20311]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_14664]]
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***EC-NUMBER
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*** [[Tiso_gene_15391]]
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* [[Tiso_gene_6007]]
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*** [[Tiso_gene_14212]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10516]]
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***EC-NUMBER
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*** [[Tiso_gene_9923]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_7201]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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* [[Tiso_gene_5836]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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*** [[orthology-synechocystis]]
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* [[Tiso_gene_15066]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
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***EC-NUMBER
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* [[CALVIN-PWY]]
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** EXPERIMENTAL_ANNOTATION
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** 0 associated gene:
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***EC-NUMBER
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* [[PEPDEPHOS-RXN]]
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* [[Tiso_gene_6188]]
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** 4 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_14504]]
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***EC-NUMBER
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*** [[Tiso_gene_18206]]
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* [[Tiso_gene_3467]]
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*** [[Tiso_gene_974]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_14505]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_10001]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
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* [[Tiso_gene_13305]]
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*** [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-101]]
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***EC-NUMBER
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** 0 associated gene:
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== Pathways  ==
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* [[PWY-7216]]
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== Reconstruction information  ==
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** 0 associated gene:
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* [[orthology]]:
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* [[PYRUVDEH-RXN]]
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** [[pantograph]]:
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** 7 associated gene(s):
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*** [[esiliculosus]]
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*** [[Tiso_gene_6983]]
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* [[annotation]]:
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*** [[Tiso_gene_9330]]
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** [[pathwaytools]]:
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*** [[Tiso_gene_2515]]
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*** [[experimental_annotation]]
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*** [[Tiso_gene_2693]]
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_7519]]
 +
*** [[Tiso_gene_19780]]
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*** [[Tiso_gene_17539]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=ORF}}
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{{#set: common name=photosynthetic 3-hydroxybutanoate biosynthesis (engineered)}}
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{{#set: common name=beta-glucosidase-like_chloroplastic}}
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{{#set: common name=photosynthetic 3-hydroxybutyrate biosynthesis (engineered)}}
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{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
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{{#set: reaction found=7}}
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{{#set: common name=beta_glucosidase}}
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{{#set: total reaction=10}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: completion rate=70.0}}
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{{#set: gene associated=Tiso_gene_6187|Tiso_gene_8669|Tiso_gene_6497|Tiso_gene_15067|Tiso_gene_2344|Tiso_gene_2843|Tiso_gene_13306|Tiso_gene_6007|Tiso_gene_5836|Tiso_gene_15066|Tiso_gene_6188|Tiso_gene_3467|Tiso_gene_10001|Tiso_gene_13305}}
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−
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:06, 18 March 2018

Pathway PWY-7218

  • taxonomic range:
  • common name:
    • photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
  • Synonym(s):
    • photosynthetic 3-hydroxybutyrate biosynthesis (engineered)

Reaction(s) found

7 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Guanine26-in-tRNA&oldid=21982"