Difference between revisions of "CPD-8984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** caffeate_o-methyltransferase
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** GA12 biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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* Synonym(s):
 
* Synonym(s):
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** gibberellin A12 biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''6''' reactions in the full pathway
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** 1 [[5-HYDROXY-CONIFERALDEHYDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPALDEHYDE]][c]
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* [[1.14.13.78-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 5-hydroxy-coniferaldehyde[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapaldehyde[c]
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*** [[Tiso_gene_1547]]
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*** [[Tiso_gene_8263]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_18257]]
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* [[1.14.13.79-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** 2 associated gene(s):
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* [[Tiso_gene_18971]]
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*** [[Tiso_gene_8263]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_3577]]
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***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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* [[RXN-5242]]
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** '''7''' reactions found over '''15''' reactions in the full pathway
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** 2 associated gene(s):
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* [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168]
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*** [[Tiso_gene_8263]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_1547]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[orthology-athaliana]]
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** [[pantograph]]:
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* [[RXN-7580]]
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*** [[esiliculosus]]
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** 2 associated gene(s):
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* [[annotation]]:
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*** [[Tiso_gene_8263]]
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** [[pathwaytools]]:
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*** [[Tiso_gene_1547]]
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*** [[in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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* [[RXN1F-160]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3577]]
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*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN1F-161]]
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** 2 associated gene(s):
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*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_3577]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R06576 R06576]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5034 PWY-5034]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=caffeate_o-methyltransferase}}
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{{#set: common name=GA12 biosynthesis}}
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{{#set: ec number=EC-2.1.1.68}}
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{{#set: common name=gibberellin A12 biosynthesis}}
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{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
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{{#set: reaction found=6}}
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{{#set: in pathway=PWY-361|PWY-5168}}
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{{#set: total reaction=6}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:06, 18 March 2018

Pathway PWY-5034

  • taxonomic range:
  • common name:
    • GA12 biosynthesis
  • Synonym(s):
    • gibberellin A12 biosynthesis

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-8984&oldid=22033"