Difference between revisions of "Tiso gene 1389"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15818 CPD-15818] == * smiles: ** [CH](=O)C(O)C(O)C(O)CO * inchi key: ** InChIKey=PYMYPHUHKU...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15818 CPD-15818] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] ==
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* smiles:
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* direction:
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** [CH](=O)C(O)C(O)C(O)CO
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=PYMYPHUHKUWMLA-LMVFSUKVSA-N
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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* common name:
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** aldehydo-D-ribose
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* molecular weight:
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** 150.131   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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* [[RXN-14883]]
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* With common name(s):
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* [[RXN-14882]]
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''=>''' 1 5-hydroxyindole acetate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
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* [[RXN0-5305]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7322]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3513]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5311110 5311110]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31215 31215]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=47014 47014]
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** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
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* METABOLIGHTS : MTBLC47014
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=[CH](=O)C(O)C(O)C(O)CO}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: inchi key=InChIKey=PYMYPHUHKUWMLA-LMVFSUKVSA-N}}
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{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
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{{#set: common name=aldehydo-D-ribose}}
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{{#set: in pathway=PWY-6313}}
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{{#set: molecular weight=150.131    }}
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{{#set: reconstruction category=orthology}}
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{{#set: consumed or produced by=RXN-14883|RXN-14882|RXN0-5305}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 19:07, 18 March 2018

Reaction RXN-10780

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1389&oldid=22068"