Difference between revisions of "Tiso gene 3762"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** TCA cycle VIII (helicobacter)
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** polyketide_synthase
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** long_chain_acyl-_synthetase
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** acyl-_synthetase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** Krebs cycle
 
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** tricarboxylic acid cycle
 
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** TCA cycle
 
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** citric acid cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 1 [[PROTON]][e] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-9247]][e] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-18346]][c]
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* [[ACONITATEHYDR-RXN]]
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* With common name(s):
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* [[CITSYN-RXN]]
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** 1 H+[e] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 cis-vaccenate[e] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 cis-vaccenoyl-CoA[c]
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* [[FUMHYDR-RXN]]
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* [[ISOCITDEH-RXN]]
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== Genes associated with this reaction  ==
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* [[RXNI-2]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_10876]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNI-3 RXNI-3]
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=TCA cycle VIII (helicobacter)}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=Krebs cycle|tricarboxylic acid cycle|TCA cycle|citric acid cycle}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: reaction found=6}}
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{{#set: common name=acyl-_synthetase}}
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{{#set: reaction not found=9}}
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{{#set: common name=ORF}}
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{{#set: completion rate=67.0}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: gene associated=Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_136|Tiso_gene_348|Tiso_gene_7855|Tiso_gene_9394|Tiso_gene_4191|Tiso_gene_500}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:07, 18 March 2018

Reaction RXN0-7238

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[e] + 1 ATP[c] + 1 coenzyme A[c] + 1 cis-vaccenate[e] => 1 H+[c] + 1 AMP[c] + 1 diphosphate[c] + 1 cis-vaccenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3762&oldid=22140"