Difference between revisions of "RXN-13202"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=6Z8E10E14Z-5S12R-512-DIHYDROXYI 6Z8E10E14Z-5S12R-512-DIHYDROXYI] == * smiles: ** CCCCCC=CCC(O)C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=6Z8E10E14Z-5S12R-512-DIHYDROXYI 6Z8E10E14Z-5S12R-512-DIHYDROXYI] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCC=CCC(O)C=CC=CC=CC(O)CCCC(=O)[O-]
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* inchi key:
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** InChIKey=VNYSSYRCGWBHLG-AMOLWHMGSA-M
 
* common name:
 
* common name:
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** 5_-nucleotidase
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** leukotriene B4
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** 5_deoxy_cytosolic_type_c_protein
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* molecular weight:
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** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** 335.462   
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
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** (6z,8e,10e,14z)-(5s,12r)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADENOSINE]][c]
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* [[LEUKOTRIENE-A4-HYDROLASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 adenosine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14435]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6988]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5911]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14246]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6640]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13929]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14434]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 71160-24-2
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23615214 23615214]
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** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
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* HMDB : HMDB01085
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P06196 P06196]
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** [http://www.genome.jp/dbget-bin/www_bget?C02165 C02165]
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** [http://www.uniprot.org/uniprot/P21588 P21588]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O34313 O34313]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57461 57461]
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** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
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* METABOLIGHTS : MTBLC57461
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** [http://www.uniprot.org/uniprot/O29385 O29385]
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{{#set: smiles=CCCCCC=CCC(O)C=CC=CC=CC(O)CCCC(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/P44569 P44569]
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{{#set: inchi key=InChIKey=VNYSSYRCGWBHLG-AMOLWHMGSA-M}}
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** [http://www.uniprot.org/uniprot/O83142 O83142]
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{{#set: common name=leukotriene B4}}
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** [http://www.uniprot.org/uniprot/P49902 P49902]
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{{#set: molecular weight=335.462    }}
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** [http://www.uniprot.org/uniprot/P22848 P22848]
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{{#set: common name=(6z,8e,10e,14z)-(5s,12r)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate}}
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** [http://www.uniprot.org/uniprot/Q05927 Q05927]
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{{#set: produced by=LEUKOTRIENE-A4-HYDROLASE-RXN}}
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** [http://www.uniprot.org/uniprot/P21589 P21589]
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** [http://www.uniprot.org/uniprot/P29240 P29240]
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** [http://www.uniprot.org/uniprot/P07024 P07024]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5_-nucleotidase}}
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{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_14435|Tiso_gene_6988|Tiso_gene_5911|Tiso_gene_14246|Tiso_gene_6640|Tiso_gene_13929|Tiso_gene_14434}}
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{{#set: in pathway=SALVADEHYPOX-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:08, 18 March 2018

Metabolite 6Z8E10E14Z-5S12R-512-DIHYDROXYI

  • smiles:
    • CCCCCC=CCC(O)C=CC=CC=CC(O)CCCC(=O)[O-]
  • inchi key:
    • InChIKey=VNYSSYRCGWBHLG-AMOLWHMGSA-M
  • common name:
    • leukotriene B4
  • molecular weight:
    • 335.462
  • Synonym(s):
    • (6z,8e,10e,14z)-(5s,12r)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 71160-24-2
  • PUBCHEM:
  • HMDB : HMDB01085
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57461
"CCCCCC=CCC(O)C=CC=CC=CC(O)CCCC(=O)[O-" cannot be used as a page name in this wiki.



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