Difference between revisions of "PWY-6976"

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(Created page with "Category:Gene == Gene Tiso_gene_801 == * left end position: ** 27820 * transcription direction: ** POSITIVE * right end position: ** 28494 * centisome position: ** 96.8629...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11637 RXN-11637] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_801 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11637 RXN-11637] ==
* left end position:
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* direction:
** 27820
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** ribosomal_rna_small_subunit_methyltransferase_i
* right end position:
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* ec number:
** 28494
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** [http://enzyme.expasy.org/EC/2.1.1.198 EC-2.1.1.198]
* centisome position:
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** 96.86292   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ACYL-COA-HYDROLASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[16S-rRNA-cytidine1402]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[16S-rRNA-2-O-methylcytidine1402]][c]
***ec-number
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* With common name(s):
* [[FACOAE1839Z12Z15Z]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytidine1402 in 16S rRNA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 2'-O-methylcytidine1402 in 16S rRNA[c]
** [[pantograph]]-[[creinhardtii]]
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* [[LINOLEOYL-RXN]]
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== Genes associated with this reaction  ==
** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
* [[PALMITOYL-COA-HYDROLASE-RXN]]
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* [[Tiso_gene_13501]]
** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
* [[RXN-10708]]
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***AUTOMATED-NAME-MATCH
** in-silico_annotation
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== Pathways ==
***ec-number
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== Reconstruction information  ==
* [[RXN-9624]]
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* Category: [[annotation]]
** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
* [[THIOESTER-RXN]]
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*** Tool: [[pathwaytools]]
** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[PWY-1121]]
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* [[PWY-321]]
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* [[PWY-5972]]
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* [[PWY-6733]]
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* [[PWY-735]]
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* [[PWY-5994]]
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* [[PWY3O-355]]
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* [[PWY-6917]]
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* [[PWY-5148]]
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== External links  ==
 
== External links  ==
{{#set: left end position=27820}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ribosomal_rna_small_subunit_methyltransferase_i}}
{{#set: right end position=28494}}
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{{#set: ec number=EC-2.1.1.198}}
{{#set: centisome position=96.86292    }}
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{{#set: gene associated=Tiso_gene_13501}}
{{#set: reaction associated=ACYL-COA-HYDROLASE-RXN|FACOAE1839Z12Z15Z|LINOLEOYL-RXN|PALMITOYL-COA-HYDROLASE-RXN|RXN-10708|RXN-9624|THIOESTER-RXN}}
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{{#set: in pathway=}}
{{#set: pathway associated=PWY-1121|PWY-321|PWY-5972|PWY-6733|PWY-735|PWY-5994|PWY3O-355|PWY-6917|PWY-5148}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:09, 18 March 2018

Reaction RXN-11637

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribosomal_rna_small_subunit_methyltransferase_i
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links