Difference between revisions of "OrPRT"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2381 RXN0-2381] == * direction: ** REVERSIBLE * common name: ** tryptophan_synthase_(alpha_bet...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2381 RXN0-2381] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
** tryptophan_synthase_(alpha_beta_chains)
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** L-glutamate biosynthesis III
* ec number:
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** [http://enzyme.expasy.org/EC/4.1.2.8 EC-4.1.2.8]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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  '''1''' reactions found over '''1''' reactions in the full pathway
** 1 [[INDOLE-3-GLYCEROL-P]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[INDOLE]][c]
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* [[GLUTDEHYD-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] '''<=>''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 indole[c]
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*** [[Tiso_gene_1154]]
 
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*** [[Tiso_gene_11511]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_2581]]
Genes have been associated with this reaction based on different elements listed below.
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** 3 reconstruction source(s) associated:
* [[Tiso_gene_17207]]
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[manual-primary_network]]
* [[Tiso_gene_4604]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6949]], DIBOA-glucoside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6949 PWY-6949]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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* ECOCYC:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14081 14081]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33154}}
** [http://www.genome.jp/dbget-bin/www_bget?R02340 R02340]
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{{#set: taxonomic range=TAX-2}}
{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2157}}
{{#set: common name=tryptophan_synthase_(alpha_beta_chains)}}
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{{#set: common name=L-glutamate biosynthesis III}}
{{#set: ec number=EC-4.1.2.8}}
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{{#set: reaction found=1}}
{{#set: gene associated=Tiso_gene_17207|Tiso_gene_4604}}
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{{#set: total reaction=1}}
{{#set: in pathway=TRPSYN-PWY|PWY-6949}}
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{{#set: completion rate=100.0}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:10, 18 March 2018

Pathway GLUTSYNIII-PWY

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links