Difference between revisions of "PROTEIN-ARGININE-DEIMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6320 PWY-6320] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3803 TAX-3803]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** phaselate biosynthesis
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.1.53 EC-3.6.1.53]
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** [http://enzyme.expasy.org/EC/3.6.1.13 EC-3.6.1.13]
 
* Synonym(s):
 
* Synonym(s):
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** o-diphenol biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[ADENOSINE_DIPHOSPHATE_RIBOSE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-15317]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
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** 1 H2O[c] '''+''' 1 ADP-D-ribose[c] '''=>''' 2 H+[c] '''+''' 1 D-ribofuranose 5-phosphate[c] '''+''' 1 AMP[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10825 RXN-10825]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15496]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17630]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17632]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7189]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9180]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2747]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3803}}
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* RHEA:
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{{#set: common name=phaselate biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10412 10412]
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{{#set: common name=o-diphenol biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01054 R01054]
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{{#set: reaction not found=5}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=20.0}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.6.1.53}}
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{{#set: ec number=EC-3.6.1.13}}
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{{#set: gene associated=Tiso_gene_15496|Tiso_gene_17630|Tiso_gene_17632|Tiso_gene_7189|Tiso_gene_9180|Tiso_gene_2747}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:11, 18 March 2018

Reaction RXN0-1441

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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