Difference between revisions of "RXN-11482"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PRISTANATE PRISTANATE] == * smiles: ** CC(CCCC(CCCC(C)CCCC(C([O-])=O)C)C)C * inchi key: ** InCh...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PRISTANATE PRISTANATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** CC(CCCC(CCCC(C)CCCC(C([O-])=O)C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PAHGJZDQXIOYTH-UHFFFAOYSA-M
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* common name:
 
* common name:
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** pristanate
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** mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
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* molecular weight:
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** ORF
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** 297.5   
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** mitochondrial_substrate_carrier_family_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.22 EC-6.1.1.22]
 
* Synonym(s):
 
* Synonym(s):
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** pristanic-acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN66-484]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 L-asparagine[c] '''+''' 1 tRNAasn[c] '''+''' 1 ATP[c] '''=>''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9303]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9304]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9908]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13908]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6065]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849056 20849056]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11180 11180]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.20171482.html 20171482]
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** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=77268 77268]
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** [http://www.uniprot.org/uniprot/P39772 P39772]
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{{#set: smiles=CC(CCCC(CCCC(C)CCCC(C([O-])=O)C)C)C}}
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** [http://www.uniprot.org/uniprot/O57980 O57980]
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{{#set: inchi key=InChIKey=PAHGJZDQXIOYTH-UHFFFAOYSA-M}}
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** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
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{{#set: common name=pristanate}}
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** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
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{{#set: molecular weight=297.5    }}
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** [http://www.uniprot.org/uniprot/P47359 P47359]
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{{#set: common name=pristanic-acid}}
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** [http://www.uniprot.org/uniprot/O51128 O51128]
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{{#set: consumed by=RXN66-484}}
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** [http://www.uniprot.org/uniprot/O83618 O83618]
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** [http://www.uniprot.org/uniprot/O58008 O58008]
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** [http://www.uniprot.org/uniprot/O96198 O96198]
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** [http://www.uniprot.org/uniprot/P54262 P54262]
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** [http://www.uniprot.org/uniprot/P75521 P75521]
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** [http://www.uniprot.org/uniprot/Q48966 Q48966]
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** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)}}
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{{#set: common name=ORF}}
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{{#set: common name=mitochondrial_substrate_carrier_family_protein}}
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{{#set: ec number=EC-6.1.1.22}}
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{{#set: gene associated=Tiso_gene_9303|Tiso_gene_9304|Tiso_gene_9908|Tiso_gene_13908|Tiso_gene_6065}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:12, 18 March 2018

Reaction ASPARAGINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
    • ORF
    • mitochondrial_substrate_carrier_family_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-asparagine[c] + 1 tRNAasn[c] + 1 ATP[c] => 1 an L-asparaginyl-[tRNAasn][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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