Difference between revisions of "TRIGLSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-5...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-58023]
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* common name:
 +
** suberin monomers biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''19''' reactions in the full pathway
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** 1 [[CPD-7418]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[COUMARIN]][c]
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* [[6.2.1.34-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 coumarinate[c] '''+''' 1 H+[c] '''=>''' 1 H2O[c] '''+''' 1 coumarin[c]
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*** [[Tiso_gene_12275]]
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*** [[Tiso_gene_14183]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-athaliana]]
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* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
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*** [[orthology-esiliculosus]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* [[annotation]]:
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*** [[Tiso_gene_10561]]
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** [[pathwaytools]]:
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*** [[Tiso_gene_14561]]
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*** [[experimental_annotation]]
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** 2 reconstruction source(s) associated:
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*** [[in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[PALMITOYL-COA-HYDROLASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_801]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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* [[RXN-1104]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18971]]
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*** [[Tiso_gene_18257]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-1126]]
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** 2 associated gene(s):
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*** [[Tiso_gene_14183]]
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*** [[Tiso_gene_12275]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-16389]]
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** 9 associated gene(s):
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*** [[Tiso_gene_9394]]
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*** [[Tiso_gene_4191]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_7855]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_348]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_13394]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-16418]]
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** 9 associated gene(s):
 +
*** [[Tiso_gene_7855]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_9394]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_348]]
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*** [[Tiso_gene_4191]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-9666]]
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** 1 associated gene(s):
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*** [[Tiso_gene_7477]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_1547]]
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*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-AMMONIA-LYASE-RXN PHENYLALANINE-AMMONIA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1103 RXN-1103]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12155 RXN-12155]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12156 RXN-12156]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12157 RXN-12157]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16416 RXN-16416]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16417 RXN-16417]
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* [http://metacyc.org/META/NEW-IMAGE?object=TYRAMINE-N-FERULOYLTRANSFERASE-RXN TYRAMINE-N-FERULOYLTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R04999 R04999]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1121 PWY-1121]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-58023}}
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{{#set: in pathway=PWY-5176}}
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{{#set: common name=suberin monomers biosynthesis}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=9}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=19}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: completion rate=47.0}}

Revision as of 18:13, 18 March 2018

Pathway PWY-1121

  • taxonomic range:
  • common name:
    • suberin monomers biosynthesis
  • Synonym(s):

Reaction(s) found

9 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links



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