Difference between revisions of "CPD66-21"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14873 CPD-14873] == * smiles: ** C(=O)([O-])C1(C=C(N)C(O)=CC=1) * inchi key: ** InChIKey=MR...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GAPOXNPHOSPHN-RXN GAPOXNPHOSPHN-RXN] == * direction: ** REVERSIBLE * common name: ** ORF * ec numbe...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GAPOXNPHOSPHN-RXN GAPOXNPHOSPHN-RXN] == |
− | * | + | * direction: |
− | ** | + | ** REVERSIBLE |
− | + | ||
− | + | ||
* common name: | * common name: | ||
− | ** | + | ** ORF |
− | * | + | * ec number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/1.2.1.12 EC-1.2.1.12] |
* Synonym(s): | * Synonym(s): | ||
− | |||
− | |||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | == | + | ** 1 [[Pi]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[DPG]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] |
− | * [[ | + | * With common name(s): |
+ | ** 1 phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 NAD+[c] '''<=>''' 1 1,3-bisphospho-D-glycerate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_20000]] | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | * [[Tiso_gene_6766]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_10646]] | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | * [[Tiso_gene_3344]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_235]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | == Pathways == | ||
+ | * [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
+ | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS] | ||
+ | ** '''12''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901] | ||
+ | ** '''8''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] | ||
+ | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] | ||
+ | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] | ||
+ | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY] | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] | ||
+ | ** '''14''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003] | ||
+ | ** '''8''' reactions found over '''10''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | * | + | * RHEA: |
− | ** [http:// | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10300 10300] |
− | * | + | * LIGAND-RXN: |
− | ** [http://www. | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01061 R01061] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P07486 P07486] |
− | * | + | ** [http://www.uniprot.org/uniprot/P08477 P08477] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P17878 P17878] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q01651 Q01651] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q27890 Q27890] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q27820 Q27820] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q7M188 Q7M188] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q7LZR1 Q7LZR1] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q58546 Q58546] |
+ | ** [http://www.uniprot.org/uniprot/P55971 P55971] | ||
+ | ** [http://www.uniprot.org/uniprot/P46795 P46795] | ||
+ | ** [http://www.uniprot.org/uniprot/P07487 P07487] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01558 Q01558] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M187 Q7M187] | ||
+ | ** [http://www.uniprot.org/uniprot/O25902 O25902] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWT8 Q9JWT8] | ||
+ | ** [http://www.uniprot.org/uniprot/P29272 P29272] | ||
+ | ** [http://www.uniprot.org/uniprot/P47543 P47543] | ||
+ | ** [http://www.uniprot.org/uniprot/O83816 O83816] | ||
+ | ** [http://www.uniprot.org/uniprot/P20445 P20445] | ||
+ | ** [http://www.uniprot.org/uniprot/P26517 P26517] | ||
+ | ** [http://www.uniprot.org/uniprot/P09124 P09124] | ||
+ | ** [http://www.uniprot.org/uniprot/P00362 P00362] | ||
+ | ** [http://www.uniprot.org/uniprot/P00358 P00358] | ||
+ | ** [http://www.uniprot.org/uniprot/P00359 P00359] | ||
+ | ** [http://www.uniprot.org/uniprot/P00360 P00360] | ||
+ | ** [http://www.uniprot.org/uniprot/P00356 P00356] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9B2 P0A9B2] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9B6 P0A9B6] | ||
+ | ** [http://www.uniprot.org/uniprot/P17721 P17721] | ||
+ | ** [http://www.uniprot.org/uniprot/P04406 P04406] | ||
+ | ** [http://www.uniprot.org/uniprot/P17244 P17244] | ||
+ | ** [http://www.uniprot.org/uniprot/P04796 P04796] | ||
+ | ** [http://www.uniprot.org/uniprot/P19089 P19089] | ||
+ | ** [http://www.uniprot.org/uniprot/P26518 P26518] | ||
+ | ** [http://www.uniprot.org/uniprot/P26988 P26988] | ||
+ | ** [http://www.uniprot.org/uniprot/P04970 P04970] | ||
+ | ** [http://www.uniprot.org/uniprot/P17329 P17329] | ||
+ | ** [http://www.uniprot.org/uniprot/P17330 P17330] | ||
+ | ** [http://www.uniprot.org/uniprot/P17331 P17331] | ||
+ | ** [http://www.uniprot.org/uniprot/P08439 P08439] | ||
+ | ** [http://www.uniprot.org/uniprot/P00357 P00357] | ||
+ | ** [http://www.uniprot.org/uniprot/P16858 P16858] | ||
+ | ** [http://www.uniprot.org/uniprot/P26521 P26521] | ||
+ | ** [http://www.uniprot.org/uniprot/P26520 P26520] | ||
+ | ** [http://www.uniprot.org/uniprot/P26519 P26519] | ||
+ | ** [http://www.uniprot.org/uniprot/P04797 P04797] | ||
+ | ** [http://www.uniprot.org/uniprot/P25861 P25861] | ||
+ | ** [http://www.uniprot.org/uniprot/P00361 P00361] | ||
+ | ** [http://www.uniprot.org/uniprot/P09317 P09317] | ||
+ | ** [http://www.uniprot.org/uniprot/P22512 P22512] | ||
+ | ** [http://www.uniprot.org/uniprot/P22513 P22513] | ||
+ | ** [http://www.uniprot.org/uniprot/P10097 P10097] | ||
+ | ** [http://www.uniprot.org/uniprot/P17819 P17819] | ||
+ | ** [http://www.uniprot.org/uniprot/P28844 P28844] | ||
+ | ** [http://www.uniprot.org/uniprot/P08735 P08735] | ||
+ | ** [http://www.uniprot.org/uniprot/P09316 P09316] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JX51 Q9JX51] | ||
+ | ** [http://www.uniprot.org/uniprot/O67161 O67161] | ||
+ | ** [http://www.uniprot.org/uniprot/P44304 P44304] | ||
+ | ** [http://www.uniprot.org/uniprot/O34425 O34425] | ||
+ | ** [http://www.uniprot.org/uniprot/P64178 P64178] | ||
+ | ** [http://www.uniprot.org/uniprot/Q46450 Q46450] | ||
+ | ** [http://www.uniprot.org/uniprot/P50321 P50321] | ||
+ | ** [http://www.uniprot.org/uniprot/P50322 P50322] | ||
+ | ** [http://www.uniprot.org/uniprot/P34917 P34917] | ||
+ | ** [http://www.uniprot.org/uniprot/P34918 P34918] | ||
+ | ** [http://www.uniprot.org/uniprot/Q07234 Q07234] | ||
+ | ** [http://www.uniprot.org/uniprot/P24748 P24748] | ||
+ | ** [http://www.uniprot.org/uniprot/P24746 P24746] | ||
+ | ** [http://www.uniprot.org/uniprot/P24749 P24749] | ||
+ | ** [http://www.uniprot.org/uniprot/P24751 P24751] | ||
+ | ** [http://www.uniprot.org/uniprot/P24750 P24750] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60143 Q60143] | ||
+ | ** [http://www.uniprot.org/uniprot/Q64467 Q64467] | ||
+ | ** [http://www.uniprot.org/uniprot/P46406 P46406] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59800 Q59800] | ||
+ | ** [http://www.uniprot.org/uniprot/P80534 P80534] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UW96 Q9UW96] | ||
+ | ** [http://www.uniprot.org/uniprot/P32809 P32809] | ||
+ | ** [http://www.uniprot.org/uniprot/P32810 P32810] | ||
+ | ** [http://www.uniprot.org/uniprot/P20287 P20287] | ||
+ | ** [http://www.uniprot.org/uniprot/P35143 P35143] | ||
+ | ** [http://www.uniprot.org/uniprot/P25858 P25858] | ||
+ | ** [http://www.uniprot.org/uniprot/P10618 P10618] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M517 Q7M517] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M516 Q7M516] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09054 Q09054] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43247 Q43247] | ||
+ | ** [http://www.uniprot.org/uniprot/P23722 P23722] | ||
+ | ** [http://www.uniprot.org/uniprot/P17729 P17729] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01597 Q01597] | ||
+ | ** [http://www.uniprot.org/uniprot/P32637 P32637] | ||
+ | ** [http://www.uniprot.org/uniprot/P29497 P29497] | ||
+ | ** [http://www.uniprot.org/uniprot/P32638 P32638] | ||
+ | ** [http://www.uniprot.org/uniprot/P32635 P32635] | ||
+ | ** [http://www.uniprot.org/uniprot/P32636 P32636] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59309 Q59309] | ||
+ | ** [http://www.uniprot.org/uniprot/P34783 P34783] | ||
+ | ** [http://www.uniprot.org/uniprot/Q00584 Q00584] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42671 Q42671] | ||
+ | ** [http://www.uniprot.org/uniprot/P34920 P34920] | ||
+ | ** [http://www.uniprot.org/uniprot/P39460 P39460] | ||
+ | ** [http://www.uniprot.org/uniprot/Q37265 Q37265] | ||
+ | ** [http://www.uniprot.org/uniprot/Q37264 Q37264] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01077 Q01077] | ||
+ | ** [http://www.uniprot.org/uniprot/P54270 P54270] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48335 Q48335] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43833 Q43833] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59906 Q59906] | ||
+ | ** [http://www.uniprot.org/uniprot/P46713 P46713] | ||
+ | ** [http://www.uniprot.org/uniprot/P75358 P75358] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M2K2 Q7M2K2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43359 Q43359] | ||
+ | ** [http://www.uniprot.org/uniprot/O68075 O68075] | ||
+ | ** [http://www.uniprot.org/uniprot/Q08060 Q08060] | ||
+ | ** [http://www.uniprot.org/uniprot/O49222 O49222] | ||
+ | ** [http://www.uniprot.org/uniprot/P34922 P34922] | ||
+ | ** [http://www.uniprot.org/uniprot/O04106 O04106] | ||
+ | ** [http://www.uniprot.org/uniprot/P49644 P49644] | ||
+ | ** [http://www.uniprot.org/uniprot/O32755 O32755] | ||
+ | ** [http://www.uniprot.org/uniprot/P34924 P34924] | ||
+ | ** [http://www.uniprot.org/uniprot/O59841 O59841] | ||
+ | ** [http://www.uniprot.org/uniprot/P78958 P78958] | ||
+ | ** [http://www.uniprot.org/uniprot/P54118 P54118] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=ORF}} | ||
+ | {{#set: ec number=EC-1.2.1.12}} | ||
+ | {{#set: gene associated=Tiso_gene_20000|Tiso_gene_6766|Tiso_gene_10646|Tiso_gene_3344|Tiso_gene_235}} | ||
+ | {{#set: in pathway=PWY-1042|PWY66-399|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|SUCSYN-PWY|P124-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|P122-PWY|PWY-7003}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:13, 18 March 2018
Contents
Reaction GAPOXNPHOSPHN-RXN
- direction:
- REVERSIBLE
- common name:
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] + 1 NAD+[c] <=> 1 1,3-bisphospho-D-glycerate[c] + 1 H+[c] + 1 NADH[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_20000
- Tiso_gene_6766
- Tiso_gene_10646
- Tiso_gene_3344
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_235
Pathways
- PWY-1042, glycolysis IV (plant cytosol): PWY-1042
- 9 reactions found over 10 reactions in the full pathway
- PWY66-399, gluconeogenesis III: PWY66-399
- 10 reactions found over 12 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 13 reactions found over 13 reactions in the full pathway
- GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
- 12 reactions found over 12 reactions in the full pathway
- PWY-6901, superpathway of glucose and xylose degradation: PWY-6901
- 8 reactions found over 12 reactions in the full pathway
- SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
- 7 reactions found over 9 reactions in the full pathway
- P124-PWY, Bifidobacterium shunt: P124-PWY
- 11 reactions found over 15 reactions in the full pathway
- ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
- 10 reactions found over 10 reactions in the full pathway
- PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
- 11 reactions found over 11 reactions in the full pathway
- P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- P122-PWY, heterolactic fermentation: P122-PWY
- 14 reactions found over 18 reactions in the full pathway
- PWY-7003, glycerol degradation to butanol: PWY-7003
- 8 reactions found over 10 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
- P07486
- P08477
- P17878
- Q01651
- Q27890
- Q27820
- Q7M188
- Q7LZR1
- Q58546
- P55971
- P46795
- P07487
- Q01558
- Q7M187
- O25902
- Q9JWT8
- P29272
- P47543
- O83816
- P20445
- P26517
- P09124
- P00362
- P00358
- P00359
- P00360
- P00356
- P0A9B2
- P0A9B6
- P17721
- P04406
- P17244
- P04796
- P19089
- P26518
- P26988
- P04970
- P17329
- P17330
- P17331
- P08439
- P00357
- P16858
- P26521
- P26520
- P26519
- P04797
- P25861
- P00361
- P09317
- P22512
- P22513
- P10097
- P17819
- P28844
- P08735
- P09316
- Q9JX51
- O67161
- P44304
- O34425
- P64178
- Q46450
- P50321
- P50322
- P34917
- P34918
- Q07234
- P24748
- P24746
- P24749
- P24751
- P24750
- Q60143
- Q64467
- P46406
- Q59800
- P80534
- Q9UW96
- P32809
- P32810
- P20287
- P35143
- P25858
- P10618
- Q7M517
- Q7M516
- Q09054
- Q43247
- P23722
- P17729
- Q01597
- P32637
- P29497
- P32638
- P32635
- P32636
- Q59309
- P34783
- Q00584
- Q42671
- P34920
- P39460
- Q37265
- Q37264
- Q01077
- P54270
- Q48335
- Q43833
- Q59906
- P46713
- P75358
- Q7M2K2
- Q43359
- O68075
- Q08060
- O49222
- P34922
- O04106
- P49644
- O32755
- P34924
- O59841
- P78958
- P54118