Difference between revisions of "RXN-12870"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16138 RXN-16138] == * direction: ** LEFT-TO-RIGHT * common name: ** abhydrolase_domain-containi...")
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16138 RXN-16138] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** norspermidine biosynthesis
+
** abhydrolase_domain-containing_protein_4-like
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
** sym-norspermidine biosynthesis
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''2''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
+
** 1 [[CPD-17355]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-10244]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Glycerolipids]][c]
* [[ASPARTATEKIN-RXN]]
+
* With common name(s):
== Reaction(s) not found ==
+
** 1 a [glycerolipid]-docosahexaenoate[c] '''+''' 1 H2O[c] '''=>''' 1 docosahexaenoate[c] '''+''' 1 H+[c] '''+''' 1 a glycerolipid[c]
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.86-RXN 4.1.1.86-RXN]
+
 
* [http://metacyc.org/META/NEW-IMAGE?object=R101-RXN R101-RXN]
+
== Genes associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11565 RXN-11565]
+
Genes have been associated with this reaction based on different elements listed below.
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9380 RXN-9380]
+
* [[Tiso_gene_12960]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15047]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12959]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15046]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY66-397]], resolvin D biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-397 PWY66-397]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY66-395]], aspirin triggered resolvin D biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-395 PWY66-395]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-641}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=norspermidine biosynthesis}}
+
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
{{#set: common name=sym-norspermidine biosynthesis}}
+
{{#set: common name=ORF}}
{{#set: reaction found=2}}
+
{{#set: ec number=EC-3.1.1.4}}
{{#set: reaction not found=6}}
+
{{#set: gene associated=Tiso_gene_12960|Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_15046}}
{{#set: completion rate=33.0}}
+
{{#set: in pathway=PWY66-397|PWY66-395}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:14, 18 March 2018

Reaction RXN-16138

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • abhydrolase_domain-containing_protein_4-like
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a [glycerolipid]-docosahexaenoate[c] + 1 H2O[c] => 1 docosahexaenoate[c] + 1 H+[c] + 1 a glycerolipid[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-397, resolvin D biosynthesis: PWY66-397
    • 1 reactions found over 11 reactions in the full pathway
  • PWY66-395, aspirin triggered resolvin D biosynthesis: PWY66-395
    • 1 reactions found over 11 reactions in the full pathway

Reconstruction information

External links