Difference between revisions of "TRANS-RXN-76"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.1.3...")
(Created page with "Category:Gene == Gene Tiso_gene_6036 == * left end position: ** 8233 * transcription direction: ** POSITIVE * right end position: ** 9508 * centisome position: ** 65.11389...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] ==
+
== Gene Tiso_gene_6036 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 8233
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/5.1.3.18 EC-5.1.3.18]
+
** POSITIVE
 +
* right end position:
 +
** 9508
 +
* centisome position:
 +
** 65.11389   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[GSHTRAN-RXN]]
−
** 1 [[GDP-MANNOSE]][c] '''<=>''' 1 [[GDP-L-GALACTOSE]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 GDP-&alpha;-D-mannose[c] '''<=>''' 1 GDP-&beta;-L-galactose[c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
* [[GST-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** in-silico_annotation
−
* [[Tiso_gene_6621]]
+
***ec-number
−
** [[pantograph]]-[[athaliana]]
+
** experimental_annotation
−
** [[pantograph]]-[[esiliculosus]]
+
***ec-number
−
== Pathways  ==
+
* [[RXN-13673]]
−
* [[PWY4FS-12]], VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-12 PWY4FS-12]
+
** in-silico_annotation
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
***ec-number
−
* [[PWY4FS-13]], extended VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-13 PWY4FS-13]
+
** experimental_annotation
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
***ec-number
−
* [[PWY-5115]], GDP-L-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115]
+
* [[RXN-15680]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** in-silico_annotation
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
+
***ec-number
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** experimental_annotation
−
== Reconstruction information  ==
+
***ec-number
−
* [[orthology]]:
+
== Pathways associated ==
−
** [[pantograph]]:
+
* [[PWY-7112]]
−
*** [[athaliana]]
+
* [[PWY-6842]]
−
*** [[esiliculosus]]
+
* [[PWY-4061]]
 +
* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=8233}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11144 11144]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=9508}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00889 R00889]
+
{{#set: centisome position=65.11389    }}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
−
{{#set: ec number=EC-5.1.3.18}}
+
{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
−
{{#set: gene associated=Tiso_gene_6621}}
+
−
{{#set: in pathway=PWY4FS-12|PWY4FS-13|PWY-5115|PWY-882}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+

Revision as of 18:14, 18 March 2018

Gene Tiso_gene_6036

  • left end position:
    • 8233
  • transcription direction:
    • POSITIVE
  • right end position:
    • 9508
  • centisome position:
    • 65.11389
  • Synonym(s):

Reactions associated

  • GSHTRAN-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • GST-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-13673
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-15680
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRANS-RXN-76&oldid=22897"