Difference between revisions of "RXN-14361"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/2.4.1.258 EC-2.4.1.258]
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** L-carnitine degradation III
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[CPD-5164]][c] '''+''' 1 [[CPD-171]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-5165]][c]
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* [[1.1.1.39-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-mannosyl phosphate[c] '''=>''' 1 H+[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
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*** [[Tiso_gene_12896]]
 
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*** [[Tiso_gene_6675]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_12200]]
Genes have been associated with this reaction based on different elements listed below.
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** 3 reconstruction source(s) associated:
* [[Tiso_gene_8232]]
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
== Pathways  ==
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*** [[orthology-esiliculosus]]
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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* [[RXN-6002]]
** '''19''' reactions found over '''19''' reactions in the full pathway
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** 1 associated gene(s):
== Reconstruction information  ==
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*** [[Tiso_gene_7322]]
* [[orthology]]:
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** 2 reconstruction source(s) associated:
** [[pantograph]]:
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*** [[annotation-in-silico_annotation]]
*** [[esiliculosus]]
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*** [[orthology-esiliculosus]]
* [[annotation]]:
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== Reaction(s) not found ==
** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5921 RXN-5921]
*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-1224}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29530 29530]
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{{#set: common name=L-carnitine degradation III}}
* LIGAND-RXN:
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{{#set: reaction found=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R06258 R06258]
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{{#set: total reaction=3}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=67.0}}
{{#set: ec number=EC-2.4.1.258}}
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{{#set: gene associated=Tiso_gene_8232}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:16, 18 March 2018

Pathway PWY-3641

  • taxonomic range:
  • common name:
    • L-carnitine degradation III
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links