Difference between revisions of "RXN1G-248"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11059 RXN-11059] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11059 RXN-11059] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** leucine--trna_ligase
 
−
** ORF
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
+
** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[LEU]][c] '''=>''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[PAPS]][c] '''+''' 1 [[N-ACETYL-SEROTONIN]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12017]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNAleu[c] '''+''' 1 L-leucine[c] '''=>''' 1 an L-leucyl-[tRNAleu][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 N-acetyl-serotonin[c] '''=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 H+[c] '''+''' 1 N-acetyl-serotonin sulfate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11524]]
+
* [[Tiso_gene_5505]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15439]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O27552 O27552]
 
−
** [http://www.uniprot.org/uniprot/P56457 P56457]
 
−
** [http://www.uniprot.org/uniprot/O51267 O51267]
 
−
** [http://www.uniprot.org/uniprot/O83595 O83595]
 
−
** [http://www.uniprot.org/uniprot/O84211 O84211]
 
−
** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
 
−
** [http://www.uniprot.org/uniprot/P47508 P47508]
 
−
** [http://www.uniprot.org/uniprot/P36430 P36430]
 
−
** [http://www.uniprot.org/uniprot/O66680 O66680]
 
−
** [http://www.uniprot.org/uniprot/O67646 O67646]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
 
−
** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
 
−
** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
 
−
** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
 
−
** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
 
−
** [http://www.uniprot.org/uniprot/P43827 P43827]
 
−
** [http://www.uniprot.org/uniprot/O58698 O58698]
 
−
** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
 
−
** [http://www.uniprot.org/uniprot/P26637 P26637]
 
−
** [http://www.uniprot.org/uniprot/P75398 P75398]
 
−
** [http://www.uniprot.org/uniprot/P73274 P73274]
 
−
** [http://www.uniprot.org/uniprot/Q48955 Q48955]
 
−
** [http://www.uniprot.org/uniprot/Q48964 Q48964]
 
−
** [http://www.uniprot.org/uniprot/Q49051 Q49051]
 
−
** [http://www.uniprot.org/uniprot/P11325 P11325]
 
−
** [http://www.uniprot.org/uniprot/P07813 P07813]
 
−
** [http://www.uniprot.org/uniprot/P10857 P10857]
 
−
** [http://www.uniprot.org/uniprot/P15181 P15181]
 
−
** [http://www.uniprot.org/uniprot/Q50192 Q50192]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=leucine--trna_ligase}}
+
{{#set: ec number=EC-2.8.2.1}}
−
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_5505}}
−
{{#set: ec number=EC-6.1.1.4}}
+
{{#set: in pathway=PWY-6398}}
−
{{#set: gene associated=Tiso_gene_11524|Tiso_gene_15439}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Revision as of 18:16, 18 March 2018

Reaction RXN-11059

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3'-phosphoadenylyl-sulfate[c] + 1 N-acetyl-serotonin[c] => 1 adenosine 3',5'-bisphosphate[c] + 1 H+[c] + 1 N-acetyl-serotonin sulfate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6398, melatonin degradation I: PWY-6398
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1G-248&oldid=23130"