Difference between revisions of "RXN-9535"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** 3-ketoacyl-_thi...")
(Created page with "Category:Gene == Gene Tiso_gene_1791 == * left end position: ** 16540 * transcription direction: ** NEGATIVE * right end position: ** 20654 * centisome position: ** 76.323...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701] ==
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== Gene Tiso_gene_1791 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 16540
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* common name:
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* transcription direction:
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** thiolase
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** NEGATIVE
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** 3-ketoacyl-_thiolase
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* right end position:
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** acetyl-_c-acetyltransferase
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** 20654
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** 76.3232   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[MONOPHENOL-MONOOXYGENASE-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-11528]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-11529]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 coenzyme A[c] '''+''' 1 OPC4-3-ketoacyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 jasmonoyl-CoA[c]
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* [[RXN-13061]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-5861]]
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* [[Tiso_gene_15327]]
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_3856]]
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* [[PWY-6955]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6133]]
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***EC-NUMBER
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* [[PWY-6481]]
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* [[Tiso_gene_10116]]
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* [[PWY-3581]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5399]]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=16540}}
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{{#set: common name=thiolase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: right end position=20654}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: centisome position=76.3232    }}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: reaction associated=MONOPHENOL-MONOOXYGENASE-RXN|RXN-13061|RXN-5861}}
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{{#set: gene associated=Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_10116|Tiso_gene_3855|Tiso_gene_17451}}
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{{#set: pathway associated=PWY-6955|PWY-6133|PWY-6481|PWY-3581|PWY-5399}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:17, 18 March 2018

Gene Tiso_gene_1791

  • left end position:
    • 16540
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 20654
  • centisome position:
    • 76.3232
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9535&oldid=23229"