Difference between revisions of "2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 3-dehydroquinate_synthase
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** L-glutamine degradation I
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** pentafunctional_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''1''' reactions in the full pathway
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** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
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* [[GLUTAMIN-RXN]]
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* With common name(s):
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** 15 associated gene(s):
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** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
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*** [[Tiso_gene_1154]]
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*** [[Tiso_gene_3434]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17333]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_4976]]
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* [[Tiso_gene_3445]]
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*** [[Tiso_gene_2973]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_3435]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_4685]]
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* [[Tiso_gene_3974]]
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*** [[Tiso_gene_2581]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_11511]]
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***EC-NUMBER
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*** [[Tiso_gene_17058]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_7495]]
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** [[pantograph]]-[[synechocystis]]
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*** [[Tiso_gene_19661]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_6657]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_1773]]
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* [[Tiso_gene_3447]]
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*** [[Tiso_gene_4975]]
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** IN-SILICO_ANNOTATION
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** 3 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_5753]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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== Reaction(s) not found ==
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* [[Tiso_gene_3446]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=L-glutamine degradation I}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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{{#set: total reaction=1}}
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** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
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** [http://www.uniprot.org/uniprot/P43879 P43879]
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** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
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** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
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** [http://www.uniprot.org/uniprot/P07639 P07639]
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** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-dehydroquinate_synthase}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-4.2.3.4}}
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{{#set: gene associated=Tiso_gene_3445|Tiso_gene_3974|Tiso_gene_3447|Tiso_gene_5753|Tiso_gene_3446|Tiso_gene_5752}}
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{{#set: in pathway=PWY-6164}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:18, 18 March 2018

Pathway GLUTAMINDEG-PWY

  • taxonomic range:
  • common name:
    • L-glutamine degradation I
  • Synonym(s):

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links




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