Difference between revisions of "2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 3-dehydroquinate_synthase
+
** L-glutamine degradation I
−
** pentafunctional_protein
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''1''' reactions in the full pathway
−
** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
+
* [[GLUTAMIN-RXN]]
−
* With common name(s):
+
** 15 associated gene(s):
−
** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
+
*** [[Tiso_gene_1154]]
−
 
+
*** [[Tiso_gene_3434]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_17333]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_4976]]
−
* [[Tiso_gene_3445]]
+
*** [[Tiso_gene_2973]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_3435]]
−
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_4685]]
−
* [[Tiso_gene_3974]]
+
*** [[Tiso_gene_2581]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_11511]]
−
***EC-NUMBER
+
*** [[Tiso_gene_17058]]
−
** [[pantograph]]-[[athaliana]]
+
*** [[Tiso_gene_7495]]
−
** [[pantograph]]-[[synechocystis]]
+
*** [[Tiso_gene_19661]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_6657]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_1773]]
−
* [[Tiso_gene_3447]]
+
*** [[Tiso_gene_4975]]
−
** IN-SILICO_ANNOTATION
+
** 3 reconstruction source(s) associated:
−
***AUTOMATED-NAME-MATCH
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_5753]]
+
*** [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-esiliculosus]]
−
***EC-NUMBER
+
== Reaction(s) not found ==
−
* [[Tiso_gene_3446]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5752]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
+
{{#set: taxonomic range=TAX-2}}
−
* UNIPROT:
+
{{#set: common name=L-glutamine degradation I}}
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
{{#set: total reaction=1}}
−
** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
+
−
** [http://www.uniprot.org/uniprot/P43879 P43879]
+
−
** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
+
−
** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
+
−
** [http://www.uniprot.org/uniprot/P07639 P07639]
+
−
** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=3-dehydroquinate_synthase}}
+
−
{{#set: common name=pentafunctional_protein}}
+
−
{{#set: ec number=EC-4.2.3.4}}
+
−
{{#set: gene associated=Tiso_gene_3445|Tiso_gene_3974|Tiso_gene_3447|Tiso_gene_5753|Tiso_gene_3446|Tiso_gene_5752}}
+
−
{{#set: in pathway=PWY-6164}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:18, 18 March 2018

Pathway GLUTAMINDEG-PWY

  • taxonomic range:
  • common name:
    • L-glutamine degradation I
  • Synonym(s):

Reaction(s) found

1 reactions found over 1 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN&oldid=23282"