Difference between revisions of "CPD-13534"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribof...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LL-DIAMINOPIMELATE LL-DIAMINOPIMELATE] == * smiles: ** C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O *...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LL-DIAMINOPIMELATE LL-DIAMINOPIMELATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O
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* inchi key:
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** InChIKey=GMKMEZVLHJARHF-WHFBIAKZSA-N
 
* common name:
 
* common name:
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** riboflavin_biosynthesis_protein
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** L,L-diaminopimelate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/4.1.99.12 EC-4.1.99.12]
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** 190.199   
 
* Synonym(s):
 
* Synonym(s):
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** L,L-A2pm
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** L,L-DAP
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** L,L-2,6-diaminopimelate
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** L,L-2,6-diaminoheptanedioate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-7737]]
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** 1 D-ribulose 5-phosphate[c] '''=>''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 H+[c] '''+''' 1 formate[c]
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* [[DIAMINOPIMEPIM-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14275]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19932]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 583-93-7
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18457 18457]
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* CAS : 14289-34-0
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* LIGAND-RXN:
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* METABOLIGHTS : MTBLC57609
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** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1549100 1549100]
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{{#set: common name=riboflavin_biosynthesis_protein}}
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* HMDB : HMDB01370
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{{#set: ec number=EC-4.1.99.12}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_14275|Tiso_gene_19932}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00666 C00666]
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{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
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* CHEBI:
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{{#set: reconstruction category=orthology}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57609 57609]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : 26dap_LL
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{{#set: reconstruction source=esiliculosus}}
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{{#set: smiles=C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=GMKMEZVLHJARHF-WHFBIAKZSA-N}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=L,L-diaminopimelate}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: molecular weight=190.199    }}
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{{#set: common name=L,L-A2pm|L,L-DAP|L,L-2,6-diaminopimelate|L,L-2,6-diaminoheptanedioate}}
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{{#set: reversible reaction associated=RXN-7737|DIAMINOPIMEPIM-RXN}}

Revision as of 18:19, 18 March 2018

Metabolite LL-DIAMINOPIMELATE

  • smiles:
    • C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O
  • inchi key:
    • InChIKey=GMKMEZVLHJARHF-WHFBIAKZSA-N
  • common name:
    • L,L-diaminopimelate
  • molecular weight:
    • 190.199
  • Synonym(s):
    • L,L-A2pm
    • L,L-DAP
    • L,L-2,6-diaminopimelate
    • L,L-2,6-diaminoheptanedioate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 583-93-7
  • CAS : 14289-34-0
  • METABOLIGHTS : MTBLC57609
  • PUBCHEM:
  • HMDB : HMDB01370
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : 26dap_LL
"C(C(CCCC(C([O-])=O)[N+])[N+])([O-])=O" cannot be used as a page name in this wiki.



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