Difference between revisions of "ILEUDEG-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] == * direction: ** L...")
(Created page with "Category:Gene == Gene Tiso_gene_13007 == * left end position: ** 1946 * transcription direction: ** POSITIVE * right end position: ** 5505 * centisome position: ** 29.5744...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] ==
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== Gene Tiso_gene_13007 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1946
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** trna_(guanine-n-)-methyltransferase
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* right end position:
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* ec number:
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** 5505
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** [http://enzyme.expasy.org/EC/2.1.1.33 EC-2.1.1.33]
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* centisome position:
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** 29.574469   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 1 [[Guanine46-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-Containing-N7-Methylguanine-46]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** experimental_annotation
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* With common name(s):
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***ec-number
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** 1 a guanine46 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 an N7-methylguanine46 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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** [[pantograph]]-[[synechocystis]]
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* [[ACONITATEHYDR-RXN]]
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== Genes associated with this reaction  ==
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** experimental_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_17963]]
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* [[RXN-14047]]
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[Tiso_gene_14922]]
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* [[PWY-5913]]
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** IN-SILICO_ANNOTATION
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* [[GLYOXYLATE-BYPASS]]
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***EC-NUMBER
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* [[PWY66-398]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5690]]
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* [[Tiso_gene_5561]]
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* [[PWY-6549]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5392]]
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***EC-NUMBER
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* [[P23-PWY]]
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* [[Tiso_gene_6175]]
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* [[P105-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6969]]
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***EC-NUMBER
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* [[FERMENTATION-PWY]]
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== Pathways  ==
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* [[PWY-6728]]
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== Reconstruction information  ==
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* [[REDCITCYC]]
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* [[orthology]]:
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* [[PWY-7254]]
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** [[pantograph]]:
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* [[PWY-7124]]
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*** [[esiliculosus]]
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* [[PWY-5750]]
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* [[annotation]]:
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* [[TCA]]
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1946}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00600 R00600]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5505}}
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{{#set: common name=ORF}}
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{{#set: centisome position=29.574469    }}
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{{#set: common name=trna_(guanine-n-)-methyltransferase}}
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{{#set: reaction associated=ACONITATEDEHYDR-RXN|ACONITATEHYDR-RXN|RXN-14047}}
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{{#set: ec number=EC-2.1.1.33}}
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{{#set: pathway associated=PWY-5913|GLYOXYLATE-BYPASS|PWY66-398|PWY-5690|PWY-6549|PWY-5392|P23-PWY|P105-PWY|PWY-6969|FERMENTATION-PWY|PWY-6728|REDCITCYC|PWY-7254|PWY-7124|PWY-5750|TCA}}
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{{#set: gene associated=Tiso_gene_17963|Tiso_gene_14922|Tiso_gene_5561|Tiso_gene_6175}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:19, 18 March 2018

Gene Tiso_gene_13007

  • left end position:
    • 1946
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5505
  • centisome position:
    • 29.574469
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ILEUDEG-PWY&oldid=23525"