Difference between revisions of "ORNITHINE-GLU-AMINOTRANSFORASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7873 RXN-7873] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.4.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-c-methyl-d-erythritol_-cycl...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7873 RXN-7873] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** 2-c-methyl-d-erythritol_-cyclodiphosphate_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
+
** [http://enzyme.expasy.org/EC/4.6.1.12 EC-4.6.1.12]
 
* Synonym(s):
 
* Synonym(s):
−
** IV
 
−
** N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GLUCOSAMINYL-ETCETERA-MANNOSYL-R]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[GLUCOSAMINYL-14-ETCETERA-MANNOSYL-R]][c] '''+''' 1 [[UDP]][c]
+
** 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''+''' 1 (N-acetyl-&beta;-D-glucosaminyl-1,2)-&alpha;-D-mannosyl-1,3-(&beta;-N-acetyl-D-glucosaminyl-1,2-&alpha;-D-mannosyl-1,6)-&beta;-D-mannosyl-R[c] '''<=>''' 1 H+[c] '''+''' 1 N-acetyl-&beta;-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-&alpha;-D-mannosyl-1,3-(&beta;-N-acetyl-D-glucosaminyl-1,2-&alpha;-D-mannosyl-1,6)-&beta;-D-mannosyl-R[c] '''+''' 1 UDP[c]
+
** 1 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''=>''' 1 CMP[c] '''+''' 1 2-C-methyl-D-erythritol-2,4-cyclodiphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2381]]
+
* [[Tiso_gene_9642]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: ec number=EC-2.4.1.145}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23864 23864]
−
{{#set: common name=IV|N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_2381}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05637 R05637]
−
{{#set: in pathway=}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=2-c-methyl-d-erythritol_-cyclodiphosphate_synthase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-4.6.1.12}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: gene associated=Tiso_gene_9642}}
 +
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:20, 18 March 2018

Reaction RXN0-302

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-c-methyl-d-erythritol_-cyclodiphosphate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ORNITHINE-GLU-AMINOTRANSFORASE-RXN&oldid=23558"