Difference between revisions of "PWY-6527"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
−
** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75]
+
* common name:
 +
** NAD/NADH phosphorylation and dephosphorylation
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''6''' reactions in the full pathway
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c]
+
* [[NAD-KIN-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 3,8-divinyl chlorophyllide a[c] '''=>''' 1 NADP+[c] '''+''' 1 chlorophyllide a[c]
+
*** [[Tiso_gene_14560]]
−
 
+
*** [[Tiso_gene_1420]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_1163]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 1 reconstruction source(s) associated:
−
* [[Tiso_gene_13868]]
+
*** [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
* [[NADH-DEHYDROG-A-RXN]]
−
== Pathways  ==
+
** 18 associated gene(s):
−
* [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526]
+
*** [[Tiso_gene_10326]]
−
** '''1''' reactions found over '''13''' reactions in the full pathway
+
*** [[Tiso_gene_18831]]
−
* [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758]
+
*** [[Tiso_gene_4894]]
−
** '''1''' reactions found over '''14''' reactions in the full pathway
+
*** [[Tiso_gene_9874]]
−
* [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759]
+
*** [[Tiso_gene_18172]]
−
** '''1''' reactions found over '''18''' reactions in the full pathway
+
*** [[Tiso_gene_18339]]
−
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
+
*** [[Tiso_gene_19691]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
*** [[Tiso_gene_2949]]
−
* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
+
*** [[Tiso_gene_4836]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
*** [[Tiso_gene_17199]]
−
* [[PWY-7760]], bacteriochlorophyll e biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7760 PWY-7760]
+
*** [[Tiso_gene_5171]]
−
** '''1''' reactions found over '''26''' reactions in the full pathway
+
*** [[Tiso_gene_18707]]
−
== Reconstruction information  ==
+
*** [[Tiso_gene_359]]
−
* [[orthology]]:
+
*** [[Tiso_gene_3113]]
−
** [[pantograph]]:
+
*** [[Tiso_gene_13075]]
−
*** [[creinhardtii]]
+
*** [[Tiso_gene_355]]
−
* [[manual]]:
+
*** [[Tiso_gene_358]]
−
** [[primary_network]]
+
*** [[Tiso_gene_15276]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5822]]
 +
** 8 associated gene(s):
 +
*** [[Tiso_gene_8159]]
 +
*** [[Tiso_gene_15256]]
 +
*** [[Tiso_gene_9372]]
 +
*** [[Tiso_gene_3271]]
 +
*** [[Tiso_gene_10738]]
 +
*** [[Tiso_gene_17309]]
 +
*** [[Tiso_gene_5996]]
 +
*** [[Tiso_gene_17310]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=NADH-KINASE-RXN NADH-KINASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PYRNUTRANSHYDROGEN-RXN PYRNUTRANSHYDROGEN-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7703 RXN-7703]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ARACYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14449 14449]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5083 PWY-5083]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=NAD/NADH phosphorylation and dephosphorylation}}
−
{{#set: ec number=EC-1.3.1.75}}
+
{{#set: reaction found=3}}
−
{{#set: gene associated=Tiso_gene_13868}}
+
{{#set: total reaction=6}}
−
{{#set: in pathway=PWY-5526|PWY-7758|PWY-7759|PWY-5064|PWY-5086|PWY-7760}}
+
{{#set: completion rate=50.0}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+

Revision as of 18:22, 18 March 2018

Pathway PWY-5083

  • taxonomic range:
  • common name:
    • NAD/NADH phosphorylation and dephosphorylation
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6527&oldid=23854"