Difference between revisions of "RXN-14501"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == * direction: ** REVERSIBLE * common name: ** ORF ** at1g17160 ** ribokinase...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
 
* common name:
 
* common name:
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** caffeine degradation IV (bacteria, via demethylation and oxidation)
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** ORF
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** at1g17160
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** ribokinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[PWY-6538]]
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** 1 [[ATP]][c] '''+''' 1 [[2-DEOXYRIBOSE]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-11519]]
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* With common name(s):
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* [[RXN-11520]]
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** 1 ATP[c] '''+''' 1 2'-deoxyribose[c] '''<=>''' 1 2-deoxy-D-ribose 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* [[RXN-11521]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_911]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17974]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_81]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18204]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_82]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7682]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-MAP:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30874 30874]
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* UM-BBD-PWY : caf
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02750 R02750]
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{{#set: common name=caffeine degradation IV (bacteria, via demethylation and oxidation)}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=4}}
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{{#set: common name=ORF}}
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{{#set: reaction not found=5}}
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{{#set: common name=at1g17160}}
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{{#set: completion rate=80.0}}
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{{#set: common name=ribokinase}}
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{{#set: ec number=EC-2.7.1.15}}
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{{#set: gene associated=Tiso_gene_911|Tiso_gene_17974|Tiso_gene_81|Tiso_gene_18204|Tiso_gene_82|Tiso_gene_7682}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:22, 18 March 2018

Reaction RXN-14223

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • at1g17160
    • ribokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 2'-deoxyribose[c] <=> 1 2-deoxy-D-ribose 5-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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