Difference between revisions of "METHYLMALONYL-COA-MUT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTNH DUTNH] == * direction: ** LEFT-TO-RIGHT * common name: ** dUTP nucleotidohydrolase * Synonym(...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTNH DUTNH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** methylmalonyl-_mitochondrial
+
** dUTP nucleotidohydrolase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/5.4.99.2 EC-5.4.99.2]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[METHYL-MALONYL-COA]][c] '''<=>''' 1 [[SUC-COA]][c]
+
** 1.0 [[WATER]][c] '''+''' 1.0 [[DUTP]][c] '''=>''' 1.0 [[PPI]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[DUMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (R)-methylmalonyl-CoA[c] '''<=>''' 1 succinyl-CoA[c]
+
** 1.0 H2O[c] '''+''' 1.0 dUTP[c] '''=>''' 1.0 diphosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 dUMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9771]]
+
* [[Tiso_gene_18793]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
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−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-43]], conversion of succinate to propanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-43 PWY0-43]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
 
−
** '''7''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 
−
** '''4''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
 
−
** '''11''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 
−
** '''8''' reactions found over '''16''' reactions in the full pathway
 
−
* [[P108-PWY]], pyruvate fermentation to propanoate I: [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22888 22888]
+
{{#set: common name=dUTP nucleotidohydrolase}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_18793}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00833 R00833]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q05064 Q05064]
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.uniprot.org/uniprot/P22033 P22033]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q05065 Q05065]
+
−
** [http://www.uniprot.org/uniprot/O74009 O74009]
+
−
** [http://www.uniprot.org/uniprot/Q9YBB0 Q9YBB0]
+
−
** [http://www.uniprot.org/uniprot/Q9V0E8 Q9V0E8]
+
−
** [http://www.uniprot.org/uniprot/Q9RV41 Q9RV41]
+
−
** [http://www.uniprot.org/uniprot/O28068 O28068]
+
−
** [http://www.uniprot.org/uniprot/Q59676 Q59676]
+
−
** [http://www.uniprot.org/uniprot/Q59677 Q59677]
+
−
** [http://www.uniprot.org/uniprot/P11652 P11652]
+
−
** [http://www.uniprot.org/uniprot/P11653 P11653]
+
−
** [http://www.uniprot.org/uniprot/P16332 P16332]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=methylmalonyl-_mitochondrial}}
+
−
{{#set: ec number=EC-5.4.99.2}}
+
−
{{#set: gene associated=Tiso_gene_9771}}
+
−
{{#set: in pathway=PWY0-43|PWY-7384|PWY-5743|PWY-6728|PROPIONMET-PWY|PWY-5789|P108-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:22, 18 March 2018

Reaction DUTNH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dUTP nucleotidohydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O[c] + 1.0 dUTP[c] => 1.0 diphosphate[c] + 1.0 H+[c] + 1.0 dUMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=METHYLMALONYL-COA-MUT-RXN&oldid=23902"