Difference between revisions of "PWY-5741"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11811 RXN-11811] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11811 RXN-11811] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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** 1 [[PROTON]][c] '''+''' 1 [[AMMONIA]][c] '''<=>''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-hexaprenyl diphosphate[c] '''=>''' 1 3-hexaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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** 1 H+[c] '''+''' 1 ammonia[c] '''<=>''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_11582]]
 
** [[pantograph]]-[[athaliana]]
 
* [[Tiso_gene_18201]]
 
** [[pantograph]]-[[athaliana]]
 
* [[Tiso_gene_10317]]
 
** [[pantograph]]-[[esiliculosus]]
 
* [[Tiso_gene_2848]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19]
 
** '''1''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[annotation]]
** [[pantograph]]:
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** Source: [[annotation-in-silico_annotation]]
*** [[athaliana]]
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*** Tool: [[pathwaytools]]
*** [[esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=REVERSIBLE}}
** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616]
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{{#set: in pathway=}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reconstruction category=annotation}}
{{#set: ec number=EC-2.5.1.39}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: gene associated=Tiso_gene_11582|Tiso_gene_18201|Tiso_gene_10317|Tiso_gene_2848}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: in pathway=PWY3O-19|PWY-7235}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Revision as of 18:23, 18 March 2018

Reaction RXN-11811

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 ammonia[c] <=> 1 ammonium[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links