Difference between revisions of "Palmitoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15680 RXN-15680] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-benzyl-3,6-dihydroxy-6-(h...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15680 RXN-15680] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine glutathione S-transferase
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** caffeine degradation IV (bacteria, via demethylation and oxidation)
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** glutathione_s-transferase
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** ORF
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** phi_class_glutathione_s-transferase
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** glutathione_s-
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
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** 2 [[GLUTATHIONE]][c] '''+''' 1 [[CPD-17045]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-17046]][c]
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* [[PWY-6538]]
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* With common name(s):
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** 0 associated gene:
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** 2 glutathione[c] '''+''' 1 3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine[c] '''=>''' 2 H2O[c] '''+''' 1 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine[c]
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* [[RXN-11519]]
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** 1 associated gene(s):
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_11775]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_8509]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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* [[RXN-11520]]
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***AUTOMATED-NAME-MATCH
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** 1 associated gene(s):
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* [[Tiso_gene_2775]]
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*** [[Tiso_gene_11775]]
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[orthology-athaliana]]
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* [[Tiso_gene_19791]]
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* [[RXN-11521]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_11775]]
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** EXPERIMENTAL_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[orthology-athaliana]]
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* [[Tiso_gene_20110]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1104]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8508]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19041]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6036]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8389]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5129]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3233]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7533]], gliotoxin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7533 PWY-7533]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-MAP:
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{{#set: common name=3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine glutathione S-transferase}}
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** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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{{#set: common name=glutathione_s-transferase}}
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* UM-BBD-PWY : caf
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=phi_class_glutathione_s-transferase}}
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{{#set: common name=caffeine degradation IV (bacteria, via demethylation and oxidation)}}
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{{#set: common name=glutathione_s-}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.5.1.18}}
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{{#set: total reaction=5}}
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{{#set: gene associated=Tiso_gene_8509|Tiso_gene_2775|Tiso_gene_19791|Tiso_gene_20110|Tiso_gene_1104|Tiso_gene_8508|Tiso_gene_19041|Tiso_gene_6036|Tiso_gene_8389|Tiso_gene_5129|Tiso_gene_3233}}
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{{#set: completion rate=80.0}}
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{{#set: in pathway=PWY-7533}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:23, 18 March 2018

Pathway PWY-6632

  • taxonomic range:
  • common name:
    • caffeine degradation IV (bacteria, via demethylation and oxidation)
  • Synonym(s):

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Palmitoyl-ACPs&oldid=23945"