Difference between revisions of "Tiso gene 19184"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREODEHYD-RXN THREODEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** L-threonine 3-deh...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name:...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
− | ** | + | ** 3-isopropylmalate dehydrogenase |
− | + | ||
− | + | ||
* Synonym(s): | * Synonym(s): | ||
+ | ** β-isopropylmalic enzyme | ||
+ | ** threo-Ds-3-isopropylmalate dehydrogenase | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[NAD]][c] '''+''' 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-7100]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 NAD+[c] '''+''' 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 NADH[c] '''+''' 1 (2S)-2-isopropyl-3-oxosuccinate[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[Tiso_gene_2920]] |
** EXPERIMENTAL_ANNOTATION | ** EXPERIMENTAL_ANNOTATION | ||
− | *** | + | ***EC-NUMBER |
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
== Pathways == | == Pathways == | ||
− | * [[ | + | * [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY] |
− | ** ''' | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
− | * [[ | + | * [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] |
− | + | ** '''6''' reactions found over '''7''' reactions in the full pathway | |
− | + | ||
− | ** ''' | + | |
== Reconstruction information == | == Reconstruction information == | ||
− | * [[ | + | * Category: [[orthology]] |
− | ** [[ | + | ** Source: [[orthology-athaliana]] |
− | *** [[experimental_annotation]] | + | *** Tool: [[pantograph]] |
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10892 10892] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04426 R04426] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P05644 P05644] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P05645 P05645] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q01987 Q01987] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q00412 Q00412] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/P08791 P08791] |
− | {{#set: common name= | + | ** [http://www.uniprot.org/uniprot/P30125 P30125] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q9PLW0 Q9PLW0] |
− | {{#set: gene associated= | + | ** [http://www.uniprot.org/uniprot/O66607 O66607] |
− | {{#set: in pathway= | + | ** [http://www.uniprot.org/uniprot/P12010 P12010] |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.uniprot.org/uniprot/P04173 P04173] |
− | {{#set: reconstruction | + | ** [http://www.uniprot.org/uniprot/Q5SIY4 Q5SIY4] |
− | {{#set: reconstruction | + | ** [http://www.uniprot.org/uniprot/P24098 P24098] |
+ | ** [http://www.uniprot.org/uniprot/Q9JU79 Q9JU79] | ||
+ | ** [http://www.uniprot.org/uniprot/P43860 P43860] | ||
+ | ** [http://www.uniprot.org/uniprot/P41019 P41019] | ||
+ | ** [http://www.uniprot.org/uniprot/P54354 P54354] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56268 Q56268] | ||
+ | ** [http://www.uniprot.org/uniprot/P29102 P29102] | ||
+ | ** [http://www.uniprot.org/uniprot/P37412 P37412] | ||
+ | ** [http://www.uniprot.org/uniprot/P23390 P23390] | ||
+ | ** [http://www.uniprot.org/uniprot/P29696 P29696] | ||
+ | ** [http://www.uniprot.org/uniprot/P41766 P41766] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02143 Q02143] | ||
+ | ** [http://www.uniprot.org/uniprot/P34733 P34733] | ||
+ | ** [http://www.uniprot.org/uniprot/P50180 P50180] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12591 Q12591] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12590 Q12590] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12592 Q12592] | ||
+ | ** [http://www.uniprot.org/uniprot/P07139 P07139] | ||
+ | ** [http://www.uniprot.org/uniprot/P41926 P41926] | ||
+ | ** [http://www.uniprot.org/uniprot/P48012 P48012] | ||
+ | ** [http://www.uniprot.org/uniprot/P87256 P87256] | ||
+ | ** [http://www.uniprot.org/uniprot/P87257 P87257] | ||
+ | ** [http://www.uniprot.org/uniprot/P73960 P73960] | ||
+ | ** [http://www.uniprot.org/uniprot/O86504 O86504] | ||
+ | ** [http://www.uniprot.org/uniprot/O85837 O85837] | ||
+ | ** [http://www.uniprot.org/uniprot/P18869 P18869] | ||
+ | ** [http://www.uniprot.org/uniprot/P34738 P34738] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=3-isopropylmalate dehydrogenase}} | ||
+ | {{#set: common name=β-isopropylmalic enzyme|threo-Ds-3-isopropylmalate dehydrogenase}} | ||
+ | {{#set: gene associated=Tiso_gene_2920}} | ||
+ | {{#set: in pathway=LEUSYN-PWY|PWY-6871}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=orthology-athaliana|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:23, 18 March 2018
Contents
Reaction 3-ISOPROPYLMALDEHYDROG-RXN
- direction:
- REVERSIBLE
- common name:
- 3-isopropylmalate dehydrogenase
- Synonym(s):
- β-isopropylmalic enzyme
- threo-Ds-3-isopropylmalate dehydrogenase
Reaction Formula
- With identifiers:
- 1 NAD[c] + 1 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE[c] <=> 1 NADH[c] + 1 CPD-7100[c] + 1 PROTON[c]
- With common name(s):
- 1 NAD+[c] + 1 (2R,3S)-3-isopropylmalate[c] <=> 1 NADH[c] + 1 (2S)-2-isopropyl-3-oxosuccinate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_2920
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-synechocystis
- pantograph-esiliculosus
- EXPERIMENTAL_ANNOTATION
Pathways
- LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: