Difference between revisions of "PWY3DJ-35471"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6115 PWY-6115] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4496 TAX-4496]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** avenacin biosynthesis, initial reactions
+
** UMP biosynthesis I
 
* Synonym(s):
 
* Synonym(s):
 +
** uridine-5'-phosphate biosynthesis I
 +
** de novo biosynthesis of uridine-5'-phosphate I
 +
** de novo biosynthesis of uridine-5'-monophosphate I
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''2''' reactions in the full pathway
+
  '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[CYCLOARTENOL-SYNTHASE-RXN]]
+
* [[ASPCARBTRANS-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13527]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CARBPSYN-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_4976]]
 +
*** [[Tiso_gene_4975]]
 +
*** [[Tiso_gene_4685]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[DIHYDROOROT-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15379]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[DIHYDROOROTATE-DEHYDROGENASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_5280]]
 +
*** [[Tiso_gene_4735]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[OROPRIBTRANS-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_11163]]
 +
*** [[Tiso_gene_11164]]
 +
*** [[Tiso_gene_18647]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[OROTPDECARB-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_20050]]
 +
*** [[Tiso_gene_18647]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[manual-primary_network]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7570 RXN-7570]
 
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4496}}
+
* ECOCYC:
−
{{#set: common name=avenacin biosynthesis, initial reactions}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5686 PWY-5686]
−
{{#set: reaction found=1}}
+
{{#set: taxonomic range=TAX-2759}}
−
{{#set: reaction not found=2}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: completion rate=50.0}}
+
{{#set: common name=UMP biosynthesis I}}
 +
{{#set: common name=uridine-5'-phosphate biosynthesis I|de novo biosynthesis of uridine-5'-phosphate I|de novo biosynthesis of uridine-5'-monophosphate I}}
 +
{{#set: reaction found=6}}
 +
{{#set: total reaction=6}}
 +
{{#set: completion rate=100.0}}

Revision as of 18:23, 18 March 2018

Pathway PWY-5686

  • taxonomic range:
  • common name:
    • UMP biosynthesis I
  • Synonym(s):
    • uridine-5'-phosphate biosynthesis I
    • de novo biosynthesis of uridine-5'-phosphate I
    • de novo biosynthesis of uridine-5'-monophosphate I

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY3DJ-35471&oldid=24043"