Difference between revisions of "Guanine46-in-tRNA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** chloroplast_beta-keto_acyl_reductase
+
** guanosine deoxyribonucleotides de novo biosynthesis I
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''2''' reactions in the full pathway
−
** 1 [[CPD-14422]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14419]][c]
+
* [[DGDPKIN-RXN]]
−
* With common name(s):
+
** 6 associated gene(s):
−
** 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 3R-hydroxy-icosatrienoyl-CoA[c]
+
*** [[Tiso_gene_9290]]
−
 
+
*** [[Tiso_gene_16529]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_18224]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_195]]
−
* [[Tiso_gene_9871]]
+
*** [[Tiso_gene_17272]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_17271]]
−
***EC-NUMBER
+
** 7 reconstruction source(s) associated:
−
** EXPERIMENTAL_ANNOTATION
+
*** [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_13083]]
+
*** [[annotation-in-silico_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** [[orthology-athaliana]]
−
***AUTOMATED-NAME-MATCH
+
*** [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[manual-primary_network]]
−
* [[Tiso_gene_9885]]
+
*** [[orthology-creinhardtii]]
−
** EXPERIMENTAL_ANNOTATION
+
* [[GDPREDUCT-RXN]]
−
***AUTOMATED-NAME-MATCH
+
** 4 associated gene(s):
−
== Pathways  ==
+
*** [[Tiso_gene_10138]]
−
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
+
*** [[Tiso_gene_10617]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
*** [[Tiso_gene_9916]]
−
* [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619]
+
*** [[Tiso_gene_9915]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** 6 reconstruction source(s) associated:
−
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
+
*** [[annotation-experimental_annotation]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
*** [[orthology-esiliculosus]]
−
== Reconstruction information  ==
+
*** [[annotation-in-silico_annotation]]
−
* [[orthology]]:
+
*** [[orthology-athaliana]]
−
** [[pantograph]]:
+
*** [[orthology-synechocystis]]
−
*** [[esiliculosus]]
+
*** [[manual-primary_network]]
−
* [[annotation]]:
+
== Reaction(s) not found ==
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2759}}
−
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: gene associated=Tiso_gene_9871|Tiso_gene_13083|Tiso_gene_9885}}
+
{{#set: common name=guanosine deoxyribonucleotides de novo biosynthesis I}}
−
{{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}}
+
{{#set: reaction found=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: total reaction=2}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: completion rate=100.0}}
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:25, 18 March 2018

Pathway PWY-7226

  • taxonomic range:
  • common name:
    • guanosine deoxyribonucleotides de novo biosynthesis I
  • Synonym(s):

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Guanine46-in-tRNA&oldid=24276"