Difference between revisions of "RXN-16997"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_8988 == * left end position: ** 505 * transcription direction: ** POSITIVE * right end position: ** 1086 * centisome position: ** 5.1965427...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...") |
||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12994 RXN-12994] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** chloroplast_beta-keto_acyl_reductase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[1 | + | * With identifiers: |
| − | * | + | ** 1 [[PROTON]][c] '''+''' 1 [[CPD-14422]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[CPD-14419]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] |
| − | ** | + | * With common name(s): |
| − | + | ** 1 H+[c] '''+''' 1 3-oxo-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 3R-hydroxy-icosatrienoyl-CoA[c] '''+''' 1 NAD(P)+[c] | |
| − | ** | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** | + | * [[Tiso_gene_9885]] |
| − | *** | + | ** EXPERIMENTAL_ANNOTATION |
| − | * [[ | + | ***AUTOMATED-NAME-MATCH |
| − | ** | + | * [[Tiso_gene_13083]] |
| − | *** | + | ** EXPERIMENTAL_ANNOTATION |
| − | * [[ | + | ***AUTOMATED-NAME-MATCH |
| − | ** in- | + | ** [[pantograph]]-[[esiliculosus]] |
| − | ** | + | * [[Tiso_gene_9871]] |
| − | * [[ | + | ** IN-SILICO_ANNOTATION |
| − | ** in | + | ***EC-NUMBER |
| − | + | ** EXPERIMENTAL_ANNOTATION | |
| − | == | + | ***EC-NUMBER |
| − | * [[ | + | == Pathways == |
| − | * [[ | + | * [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602] |
| − | * [[ | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-7619]], juniperonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619] |
| − | * [[ | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| + | * [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=chloroplast_beta-keto_acyl_reductase}} |
| − | {{#set: | + | {{#set: ec number=EC-1.1.1.330}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083|Tiso_gene_9871}} |
| − | {{#set: | + | {{#set: in pathway=PWY-7602|PWY-7619|PWY-7724}} |
| − | {{#set: | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 18:25, 18 March 2018
Contents
Reaction RXN-12994
- direction:
- LEFT-TO-RIGHT
- common name:
- chloroplast_beta-keto_acyl_reductase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 CPD-14422[c] + 1 NADH-P-OR-NOP[c] => 1 CPD-14419[c] + 1 NAD-P-OR-NOP[c]
- With common name(s):
- 1 H+[c] + 1 3-oxo-icosatrienoyl-CoA[c] + 1 NAD(P)H[c] => 1 3R-hydroxy-icosatrienoyl-CoA[c] + 1 NAD(P)+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_9885
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_13083
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-esiliculosus
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_9871
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): PWY-7602
- 7 reactions found over 7 reactions in the full pathway
- PWY-7619, juniperonate biosynthesis: PWY-7619
- 4 reactions found over 5 reactions in the full pathway
- PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
