Difference between revisions of "P241-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathione_gamma * ec numb...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** phycourobilin biosynthesis
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** cystathione_gamma
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* ec number:
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** [http://enzyme.expasy.org/EC/4.4.1.8 EC-4.4.1.8]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[1.3.7.3-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-13717]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[SELENOHOMOCYSTEINE]][c] '''+''' 1 [[PYRUVATE]][c]
== Reaction(s) not found ==
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* With common name(s):
* [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.2-RXN 1.3.7.2-RXN]
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** 1 H2O[c] '''+''' 1 L-selenocystathionine[c] '''=>''' 1 ammonium[c] '''+''' 1 seleno-L-homocysteine[c] '''+''' 1 pyruvate[c]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15985 RXN-15985]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15990 RXN-15990]
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== Genes associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523]
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Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3732]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-1117}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=phycourobilin biosynthesis}}
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{{#set: common name=cystathione_gamma}}
{{#set: reaction found=1}}
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{{#set: ec number=EC-4.4.1.8}}
{{#set: reaction not found=5}}
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{{#set: gene associated=Tiso_gene_3732}}
{{#set: completion rate=20.0}}
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{{#set: in pathway=PWY-6936}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:27, 18 March 2018

Reaction RXN-12729

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cystathione_gamma
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6936, seleno-amino acid biosynthesis: PWY-6936
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links