Difference between revisions of "CPD-809"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11839 RXN-11839] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11839 RXN-11839] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** trna_pseudouridinesynthase
 
** trna_pseudouridine_synthase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/5.4.99.25 EC-5.4.99.25]
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** [http://enzyme.expasy.org/EC/6.3.4.11 EC-6.3.4.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[tRNA-uridine55]][c] '''=>''' 1 [[tRNA-pseudouridine55]][c]
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** 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Apo-3-methylcrotonoyl-CoA-carbon-dioxide]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[3-methylcrotonoyl-CoA-carbon-dioxide]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a uridine55 in tRNA[c] '''=>''' 1 a pseudouridine55 in tRNA[c]
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** 1 biotin[c] '''+''' 1 ATP[c] '''+''' 1 an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''=>''' 1 AMP[c] '''+''' 1 a holo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_4021]]
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* [[Tiso_gene_17216]]
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8713]]
* [[Tiso_gene_11913]]
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** [[pantograph]]-[[esiliculosus]]
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18959]]
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** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_9833]]
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** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_4020]]
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** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_2988]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_19622]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[orthology]]
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04604 R04604]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=trna_pseudouridinesynthase}}
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{{#set: ec number=EC-6.3.4.11}}
{{#set: common name=trna_pseudouridine_synthase}}
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{{#set: gene associated=Tiso_gene_17216|Tiso_gene_8713}}
{{#set: ec number=EC-5.4.99.25}}
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{{#set: gene associated=Tiso_gene_4021|Tiso_gene_11913|Tiso_gene_18959|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_2988|Tiso_gene_19622}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 19:27, 18 March 2018

Reaction 6.3.4.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links