Difference between revisions of "Tiso gene 432"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14326 RXN-14326] == * direction: ** LEFT-TO-RIGHT * common name: ** diphthine_synthase * ec num...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAICARSYN-RXN SAICARSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylamino...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14326 RXN-14326] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAICARSYN-RXN SAICARSYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** diphthine_synthase
+
** phosphoribosylaminoimidazole-succinocarboxamide_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.98 EC-2.1.1.98]
+
** [http://enzyme.expasy.org/EC/6.3.2.6 EC-6.3.2.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-3-CARBOXY-3-AMINOPROPYL-L-HISTIDINE]][c] '''+''' 3 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[DIPHTINE]][c]
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''=>''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2][c] '''+''' 3 S-adenosyl-L-methionine[c] '''=>''' 3 S-adenosyl-L-homocysteine[c] '''+''' 3 H+[c] '''+''' 1 a diphthine-[translation elongation factor 2][c]
+
** 1 L-aspartate[c] '''+''' 1 ATP[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''=>''' 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15743]]
+
* [[Tiso_gene_20436]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482]
+
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[manual]]
−
** [[pathwaytools]]:
+
** Source: [[manual-primary_network]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22628 22628]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10306 R10306]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04591 R04591]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q07296 Q07296]
 +
** [http://www.uniprot.org/uniprot/Q9PHZ9 Q9PHZ9]
 +
** [http://www.uniprot.org/uniprot/P0A7D7 P0A7D7]
 +
** [http://www.uniprot.org/uniprot/P12046 P12046]
 +
** [http://www.uniprot.org/uniprot/Q58987 Q58987]
 +
** [http://www.uniprot.org/uniprot/Q9JV73 Q9JV73]
 +
** [http://www.uniprot.org/uniprot/P50124 P50124]
 +
** [http://www.uniprot.org/uniprot/P27602 P27602]
 +
** [http://www.uniprot.org/uniprot/P27616 P27616]
 +
** [http://www.uniprot.org/uniprot/P22234 P22234]
 +
** [http://www.uniprot.org/uniprot/P73471 P73471]
 +
** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=diphthine_synthase}}
+
{{#set: common name=phosphoribosylaminoimidazole-succinocarboxamide_synthase}}
−
{{#set: ec number=EC-2.1.1.98}}
+
{{#set: ec number=EC-6.3.2.6}}
−
{{#set: gene associated=Tiso_gene_15743}}
+
{{#set: gene associated=Tiso_gene_20436}}
−
{{#set: in pathway=PWY-6482}}
+
{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=orthology-creinhardtii|manual-primary_network|annotation-in-silico_annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:28, 18 March 2018

Reaction SAICARSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylaminoimidazole-succinocarboxamide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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