Difference between revisions of "Tiso gene 8563"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Tiso_gene_8723 == * left end position: ** 1 * transcription direction: ** POSITIVE * right end position: ** 4472 * centisome position: ** 1.004520400...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHTINE--AMMONIA-LIGASE-RXN DIPHTINE--AMMONIA-LIGASE-RXN] ==
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== Gene Tiso_gene_8723 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1
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* common name:
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* transcription direction:
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** endoribonuclease_l-psp_domain-containing_protein
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.1.14 EC-6.3.1.14]
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** 4472
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* centisome position:
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** 1.004520400e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GPH-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[AMP]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 ATP[c] '''+''' 1 a diphthine-[translation elongation factor 2][c] '''+''' 1 ammonium[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 a diphthamide-[translation elongation factor 2][c] '''+''' 1 AMP[c]
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* [[QUINOPRIBOTRANS-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_3764]]
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* [[PWY-5316]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5653]]
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***EC-NUMBER
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* [[PYRIDNUCSYN-PWY]]
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== Pathways ==
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* [[PWY-181]]
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* [[PWY-6482]], diphthamide biosynthesis (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6482 PWY-6482]
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* [[PWY-7342]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7546]], diphthamide biosynthesis (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7546 PWY-7546]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19753 19753]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4472}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
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{{#set: centisome position=1.004520400e-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GPH-RXN|QUINOPRIBOTRANS-RXN}}
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{{#set: common name=endoribonuclease_l-psp_domain-containing_protein}}
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{{#set: pathway associated=PWY-5316|PWY-5653|PYRIDNUCSYN-PWY|PWY-181|PWY-7342}}
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{{#set: ec number=EC-6.3.1.14}}
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{{#set: gene associated=Tiso_gene_3764}}
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{{#set: in pathway=PWY-6482|PWY-7546}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:29, 18 March 2018

Gene Tiso_gene_8723

  • left end position:
    • 1
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4472
  • centisome position:
    • 1.004520400e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8563&oldid=24782"