Difference between revisions of "HGDO"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
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* common name:
 
* common name:
** L-glutamate degradation V (via hydroxyglutarate)
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** acyl-coenzyme_a_oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
** L-glutamate fermentation
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** 1 [[CPD-17385]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-17386]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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* With common name(s):
* [[RXN-11662]]
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** 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
* [[RXN-11667]]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-ADP-FORMING-RXN ACETATE--COA-LIGASE-ADP-FORMING-RXN]
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Genes have been associated with this reaction based on different elements listed below.
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
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* [[Tiso_gene_18566]]
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
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** IN-SILICO_ANNOTATION
* [http://metacyc.org/META/NEW-IMAGE?object=KETOGLUTREDUCT-RXN KETOGLUTREDUCT-RXN]
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***EC-NUMBER
* [http://metacyc.org/META/NEW-IMAGE?object=R11-RXN R11-RXN]
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== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1082 RXN-1082]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1083 RXN-1083]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-1239}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-32066}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
{{#set: common name=L-glutamate degradation V (via hydroxyglutarate)}}
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{{#set: ec number=EC-1.3.3.6}}
{{#set: common name=L-glutamate fermentation}}
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{{#set: gene associated=Tiso_gene_18566}}
{{#set: reaction found=4}}
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{{#set: in pathway=PWY-7606}}
{{#set: reaction not found=11}}
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{{#set: reconstruction category=annotation}}
{{#set: completion rate=36.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:31, 18 March 2018

Reaction RXN-16134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 oxygen[c] => 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] + 1 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links