Difference between revisions of "Tiso gene 18959"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14385 RXN-14385] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14385 RXN-14385] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 4-deoxy-L-threo-hex-4-enopyranuronate degradation
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** cysteine_mitochondrial
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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* ec number:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 
* Synonym(s):
 
* Synonym(s):
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** 5-dehydro-4-deoxy-D-glucuronate degradation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[KDPGALDOL-RXN]]
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** 1 [[CYS]][c] '''+''' 1 [[CD-S-SP-Complex]][c] '''=>''' 1 [[S-CD-S-SP-Complex]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.127-RXN 1.1.1.127-RXN]
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** 1 L-cysteine[c] '''+''' 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''=>''' 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''+''' 1 L-alanine[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.17-RXN 5.3.1.17-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16475 RXN-16475]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14710]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11478]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4284]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-MAP:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: common name=4-deoxy-L-threo-hex-4-enopyranuronate degradation}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: common name=5-dehydro-4-deoxy-D-glucuronate degradation}}
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{{#set: gene associated=Tiso_gene_14710|Tiso_gene_11478|Tiso_gene_4284}}
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{{#set: reaction found=1}}
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{{#set: in pathway=PWY-7250}}
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{{#set: reaction not found=5}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: completion rate=20.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:31, 18 March 2018

Reaction RXN-14385

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cysteine[c] + 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] => 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] + 1 L-alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18959&oldid=24998"