Difference between revisions of "CPD-14276"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7984 RXN-7984] == * direction: ** LEFT-TO-RIGHT * common name: ** violaxanthin_de-epoxidase **...")
(Created page with "Category:Gene == Gene Tiso_gene_14027 == * Synonym(s): == Reactions associated == * 3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN ** pantograph-athaliana ** pantog...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7984 RXN-7984] ==
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== Gene Tiso_gene_14027 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** violaxanthin_de-epoxidase
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** violaxanthin_de-_chloroplast
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* Synonym(s):
 
* Synonym(s):
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** VDE
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN]]
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** 1 [[CPD1F-133]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASCORBATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
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** [[pantograph]]-[[athaliana]]
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 violaxanthin[c] '''+''' 1 H+[c] '''+''' 1 L-ascorbate[c] '''=>''' 1 H2O[c] '''+''' 1 antheraxanthin[c] '''+''' 1 L-dehydro-ascorbate[c]
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** [[pantograph]]-[[creinhardtii]]
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* [[HBCO_nadp]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[OHACYL-COA-DEHYDROG-RXN]]
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* [[Tiso_gene_1275]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[RXN-10698]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16523]]
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* [[RXN-10702]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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* [[RXN-10703]]
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* [[Tiso_gene_5666]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[RXN-11245]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-11662]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12490]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12570]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12705]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12750]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14275]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN0-2044]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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* [[PWY-6920]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[P162-PWY]]
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== Reconstruction information  ==
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* [[PWY-5177]]
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* [[orthology]]:
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* [[PWY-6583]]
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** [[pantograph]]:
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* [[PWY-6883]]
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*** [[esiliculosus]]
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* [[PWY-5136]]
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* [[annotation]]:
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* [[PWY-7778]]
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** [[pathwaytools]]:
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* [[PWY-7779]]
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*** [[in-silico_annotation]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[PWY-5789]]
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* [[FAO-PWY]]
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* [[CENTFERM-PWY]]
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* [[PWY-6945]]
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* [[PWY0-321]]
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* [[PWY-7007]]
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* [[PWY-6435]]
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* [[PWY-7216]]
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* [[PWY-1361]]
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* [[PWY-6946]]
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* [[PWY-6944]]
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* [[PWY-735]]
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* [[PWY-7401]]
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* [[PWY-6863]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN|HBCO_nadp|OHACYL-COA-DEHYDROG-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-12490|RXN-12570|RXN-12705|RXN-12750|RXN-14275|RXN0-2044}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15353 15353]
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{{#set: pathway associated=PWY-6920|P162-PWY|PWY-5177|PWY-6583|PWY-6883|PWY-5136|PWY-7778|PWY-7779|PWY-7094|PWY66-391|PWY-5789|FAO-PWY|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-7007|PWY-6435|PWY-7216|PWY-1361|PWY-6946|PWY-6944|PWY-735|PWY-7401|PWY-6863}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07178 R07178]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=violaxanthin_de-epoxidase}}
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{{#set: common name=violaxanthin_de-_chloroplast}}
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{{#set: common name=VDE}}
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{{#set: gene associated=Tiso_gene_1275|Tiso_gene_16523|Tiso_gene_5666}}
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{{#set: in pathway=PWY-5945}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:32, 18 March 2018

Gene Tiso_gene_14027

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-14276&oldid=25083"