Difference between revisions of "ORNCARBAMTRANSFER-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] == * direction: ** REVERSIBLE * common name: ** cytoplasmic...")
(Created page with "Category:Gene == Gene Tiso_gene_11164 == * left end position: ** 2174 * transcription direction: ** POSITIVE * right end position: ** 3854 * centisome position: ** 27.2328...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLUCMUT-RXN PHOSPHOGLUCMUT-RXN] ==
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== Gene Tiso_gene_11164 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2174
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* common name:
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* transcription direction:
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** cytoplasmic
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** POSITIVE
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** pgm_pmm
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* right end position:
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* ec number:
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** 3854
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** [http://enzyme.expasy.org/EC/5.4.2.2 EC-5.4.2.2]
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* centisome position:
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** 27.23287   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[OROPRIBTRANS-RXN]]
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** 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 &alpha;-D-glucopyranose 1-phosphate[c] '''<=>''' 1 D-glucopyranose 6-phosphate[c]
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== Pathways associated ==
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* [[PWY-7790]]
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== Genes associated with this reaction  ==
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* [[PWY-7791]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5686]]
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* [[Tiso_gene_4816]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13477]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7343]], UDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6731]], starch degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6731 PWY-6731]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6737]], starch degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6737 PWY-6737]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYNTH-PWY GLYCOGENSYNTH-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5941]], glycogen degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5941 PWY-5941]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5940]], streptomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2174}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23536 23536]
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{{#set: transcription direction=POSITIVE}}
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* PIR:
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{{#set: right end position=3854}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801]
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{{#set: centisome position=27.23287    }}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614]
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{{#set: reaction associated=OROPRIBTRANS-RXN}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614]
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{{#set: pathway associated=PWY-7790|PWY-7791|PWY-5686}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P36871 P36871]
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** [http://www.uniprot.org/uniprot/P40390 P40390]
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** [http://www.uniprot.org/uniprot/P40391 P40391]
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** [http://www.uniprot.org/uniprot/P95090 P95090]
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** [http://www.uniprot.org/uniprot/P36938 P36938]
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** [http://www.uniprot.org/uniprot/P57002 P57002]
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** [http://www.uniprot.org/uniprot/P38569 P38569]
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** [http://www.uniprot.org/uniprot/P31120 P31120]
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** [http://www.uniprot.org/uniprot/P00949 P00949]
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** [http://www.uniprot.org/uniprot/P38652 P38652]
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** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5]
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** [http://www.uniprot.org/uniprot/Q16106 Q16106]
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** [http://www.uniprot.org/uniprot/P33401 P33401]
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** [http://www.uniprot.org/uniprot/P37012 P37012]
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** [http://www.uniprot.org/uniprot/P74643 P74643]
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** [http://www.uniprot.org/uniprot/Q51847 Q51847]
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** [http://www.uniprot.org/uniprot/P93804 P93804]
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** [http://www.uniprot.org/uniprot/P93805 P93805]
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** [http://www.uniprot.org/uniprot/P93262 P93262]
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** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=cytoplasmic}}
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{{#set: common name=pgm_pmm}}
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{{#set: ec number=EC-5.4.2.2}}
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{{#set: gene associated=Tiso_gene_4816|Tiso_gene_13477}}
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{{#set: in pathway=PWY-7238|PWY-5384|GLYCOCAT-PWY|PWY-7343|PWY-3801|PWY-622|PWY-6731|GLUCOSE1PMETAB-PWY|PWY-6737|PWY-6317|PWY-2723|GLYCOGENSYNTH-PWY|PWY-5661|PWY66-422|PWY-5941|PWY-5940}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:33, 18 March 2018

Gene Tiso_gene_11164

  • left end position:
    • 2174
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3854
  • centisome position:
    • 27.23287
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ORNCARBAMTRANSFER-RXN&oldid=25276"