Difference between revisions of "ALDDH"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11281 CPD-11281] == * smiles: ** C(SS)C(C(NCC([O-])=O)=O)NC(=O)CCC([N+])C([O-])=O * inchi k...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** ferredoxin-dependent_g...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == |
− | * | + | * direction: |
− | ** | + | ** REVERSIBLE |
− | + | ||
− | + | ||
* common name: | * common name: | ||
− | ** | + | ** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits |
− | * | + | ** glutamate_synthase |
− | ** | + | * ec number: |
+ | ** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | |||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | * [[ | + | ** 1 [[NADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c] |
− | == | + | * With common name(s): |
− | * [[ | + | ** 1 NADP+[c] '''+''' 1 L-glutamate[c] '''+''' 1 H2O[c] '''<=>''' 1 ammonium[c] '''+''' 1 NADPH[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 H+[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_1154]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_11511]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_2581]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | == Pathways == | ||
+ | * [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | * | + | * RHEA: |
− | ** [http:// | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612] |
− | * | + | * LIGAND-RXN: |
− | ** [http://www. | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P07262 P07262] |
− | + | ** [http://www.uniprot.org/uniprot/P15111 P15111] | |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P28724 P28724] |
− | {{#set: common name= | + | ** [http://www.uniprot.org/uniprot/P43793 P43793] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P00370 P00370] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P00369 P00369] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P29507 P29507] |
+ | ** [http://www.uniprot.org/uniprot/P28998 P28998] | ||
+ | ** [http://www.uniprot.org/uniprot/P29051 P29051] | ||
+ | ** [http://www.uniprot.org/uniprot/P31026 P31026] | ||
+ | ** [http://www.uniprot.org/uniprot/P39475 P39475] | ||
+ | ** [http://www.uniprot.org/uniprot/P39708 P39708] | ||
+ | ** [http://www.uniprot.org/uniprot/P54387 P54387] | ||
+ | ** [http://www.uniprot.org/uniprot/P54386 P54386] | ||
+ | ** [http://www.uniprot.org/uniprot/P95544 P95544] | ||
+ | ** [http://www.uniprot.org/uniprot/P78804 P78804] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}} | ||
+ | {{#set: common name=glutamate_synthase}} | ||
+ | {{#set: ec number=EC-1.4.1.4}} | ||
+ | {{#set: gene associated=Tiso_gene_1154|Tiso_gene_11511|Tiso_gene_2581}} | ||
+ | {{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}} | ||
+ | {{#set: reconstruction category=manual|annotation}} | ||
+ | {{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} |
Revision as of 18:33, 18 March 2018
Contents
Reaction GLUTDEHYD-RXN
- direction:
- REVERSIBLE
- common name:
- ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
- glutamate_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 NADP+[c] + 1 L-glutamate[c] + 1 H2O[c] <=> 1 ammonium[c] + 1 NADPH[c] + 1 2-oxoglutarate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_1154
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_11511
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_2581
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- GLUTSYNIII-PWY, L-glutamate biosynthesis III: GLUTSYNIII-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
- 9 reactions found over 11 reactions in the full pathway
- PWY-5675, nitrate reduction V (assimilatory): PWY-5675
- 2 reactions found over 4 reactions in the full pathway
- PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: