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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] == | + | == Gene Tiso_gene_10958 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** tryptophan--trna_ligase
| + | |
| − | ** tryptophan--trna_cytoplasmic
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.2 EC-6.1.1.2]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[SPMDtmi]] |
| − | ** 1 [[TRP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[AMP]][c]
| + | ** [[pantograph]]-[[creinhardtii]] |
| − | * With common name(s):
| + | * [[TRANS-RXN-261]] |
| − | ** 1 a tRNAtrp[c] '''+''' 1 ATP[c] '''+''' 1 L-tryptophan[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-tryptophanyl-[tRNAtrp][c] '''+''' 1 AMP[c]
| + | ** [[pantograph]]-[[creinhardtii]] |
| − | | + | ** [[pantograph]]-[[creinhardtii]] |
| − | == Genes associated with this reaction ==
| + | * [[TRANS-RXN-69]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | ** [[pantograph]]-[[creinhardtii]] |
| − | * [[Tiso_gene_12988]] | + | == Pathways associated == |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[Tiso_gene_14318]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_14319]]
| + | |
| − | ** IN-SILICO_ANNOTATION | + | |
| − | ***EC-NUMBER
| + | |
| − | == Pathways ==
| + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]: | + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]: | + | |
| − | ** [[pathwaytools]]: | + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=SPMDtmi|TRANS-RXN-261|TRANS-RXN-69}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24080 24080]
| + | |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P23381 P23381]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84589 O84589]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43835 P43835]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O26352 O26352]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51038 O51038]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58810 Q58810]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83640 O83640]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P67590 P67590]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67115 O67115]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47372 P47372]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P32921 P32921]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q12109 Q12109]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q49901 Q49901]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75510 P75510]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O42875 O42875]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O96771 O96771]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P17248 P17248]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21656 P21656]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P04803 P04803]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00954 P00954]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=tryptophan--trna_ligase}}
| + | |
| − | {{#set: common name=tryptophan--trna_cytoplasmic}}
| + | |
| − | {{#set: ec number=EC-6.1.1.2}}
| + | |
| − | {{#set: gene associated=Tiso_gene_12988|Tiso_gene_14318|Tiso_gene_14319}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
