Difference between revisions of "RXN-17678"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17854 RXN-17854] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17854 RXN-17854] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
+
** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
−
** [http://enzyme.expasy.org/EC/2.3.1.bx EC-2.3.1.bx]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETYL-COA]][c] '''+''' 1 [[L-methionyl-L-leucyl-Protein]][c] '''=>''' 1 [[N-Ac-L-methionyl-L-leucyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 acetyl-CoA[c] '''+''' 1 an N-terminal-L-methionyl-L-leucyl-[protein][c] '''=>''' 1 an N-terminal Nα-acetyl-L-methionyl-L-leucyl-[protein][c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
+
** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 pyridoxamine 5'-phosphate[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_1471]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
 +
** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
 +
** [http://www.uniprot.org/uniprot/P44909 P44909]
 +
** [http://www.uniprot.org/uniprot/P38075 P38075]
 +
** [http://www.uniprot.org/uniprot/P74211 P74211]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.bv}}
+
{{#set: common name=pyridoxamine_5_-phosphate_oxidase-related_fmn-binding}}
−
{{#set: ec number=EC-2.3.1.bx}}
+
{{#set: ec number=EC-1.4.3.5}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: gene associated=Tiso_gene_1471}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-7204|PLPSAL-PWY}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:34, 18 March 2018

Reaction PMPOXI-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 8 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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