Difference between revisions of "Cis-delta15-3-hydroxygheddoyl-ACPs"

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(Created page with "Category:Gene == Gene Tiso_gene_12041 == * left end position: ** 5069 * transcription direction: ** POSITIVE * right end position: ** 7267 * centisome position: ** 69.0035...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-bindi...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_12041 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] ==
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* left end position:
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* direction:
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** 5069
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** gtp-binding_protein
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* right end position:
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* ec number:
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** 7267
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** [http://enzyme.expasy.org/EC/6.5.1.3 EC-6.5.1.3]
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* centisome position:
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** 69.00354   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DIAMINOPIMDECARB-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''+''' 1 [[3Prime-OH-Terminated-RNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[RNAs]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[athaliana]]
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** 1 ATP[c] '''+''' 1 a 5'-phospho-ribonucleoside-[RNA][c] '''+''' 1 an [RNA]-3'-hydroxyl[c] '''=>''' 1 AMP[c] '''+''' 1 a ribonucleic acid[c] '''+''' 1 diphosphate[c]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_8397]]
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* [[PWY-5097]]
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** IN-SILICO_ANNOTATION
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* [[PWY-2942]]
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***EC-NUMBER
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* [[DAPLYSINESYN-PWY]]
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* [[Tiso_gene_8398]]
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* [[PWY-2941]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8396]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5069}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07640 R07640]
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{{#set: right end position=7267}}
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* UNIPROT:
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{{#set: centisome position=69.00354    }}
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** [http://www.uniprot.org/uniprot/P00971 P00971]
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{{#set: reaction associated=DIAMINOPIMDECARB-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: common name=gtp-binding_protein}}
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{{#set: ec number=EC-6.5.1.3}}
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{{#set: gene associated=Tiso_gene_8397|Tiso_gene_8398|Tiso_gene_8396}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:36, 18 March 2018

Reaction RNA-LIGASE-ATP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • gtp-binding_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a 5'-phospho-ribonucleoside-[RNA][c] + 1 an [RNA]-3'-hydroxyl[c] => 1 AMP[c] + 1 a ribonucleic acid[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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