Difference between revisions of "Tiso gene 5890"

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(Created page with "Category:Gene == Gene Tiso_gene_9915 == * left end position: ** 3292 * transcription direction: ** POSITIVE * right end position: ** 8810 * centisome position: ** 36.67149...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9915 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] ==
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* left end position:
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* direction:
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** 3292
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** ORF
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** 8810
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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** 36.671494   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADPREDUCT-RXN]]
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* With identifiers:
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** experimental_annotation
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** 1 [[ISOBUTANOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7000]][c] '''+''' 1 [[NADH]][c]
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***ec-number
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* With common name(s):
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* [[CDPREDUCT-RXN]]
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** 1 isobutanol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 isobutanal[c] '''+''' 1 NADH[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[GDPREDUCT-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** experimental_annotation
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* [[Tiso_gene_5425]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_6563]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_7649]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN0-722]]
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_6562]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN0-747]]
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_5424]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN0-748]]
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***EC-NUMBER
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** experimental_annotation
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== Pathways ==
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***ec-number
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* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
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* [[UDPREDUCT-RXN]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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** experimental_annotation
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* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
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***ec-number
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
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* [[PWY-7210]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7198]]
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== Reconstruction information  ==
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* [[PWY-7220]]
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* Category: [[annotation]]
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* [[PWY-7184]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7222]]
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*** Tool: [[pathwaytools]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PWY-7226]]
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* [[PWY-6545]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3292}}
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{{#set: direction=REVERSIBLE}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=8810}}
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{{#set: common name=ORF}}
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{{#set: centisome position=36.671494    }}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
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{{#set: gene associated=Tiso_gene_5425|Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_6562|Tiso_gene_5424}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
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{{#set: in pathway=PWY-7396|PWY-7111|PWY-5057}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:36, 18 March 2018

Reaction RXN-7657

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 isobutanol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 isobutanal[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7396, butanol and isobutanol biosynthesis (engineered): PWY-7396
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5057, L-valine degradation II: PWY-5057
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5890&oldid=25555"