Difference between revisions of "URIDINE-NUCLEOSIDASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Tiso_gene_9959 == * left end position: ** 3005 * transcription direction: ** POSITIVE * right end position: ** 7954 * centisome position: ** 33.59419...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSNACMURPENTATRANS-RXN PHOSNACMURPENTATRANS-RXN] ==
+
== Gene Tiso_gene_9959 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3005
−
* common name:
+
* transcription direction:
−
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase
+
** POSITIVE
−
** ORF
+
* right end position:
−
* ec number:
+
** 7954
−
** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
+
* centisome position:
 +
** 33.59419   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ATPASE-RXN]]
−
** 1 [[CPD-9646]][c] '''+''' 1 [[C1]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''=>''' 1 undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1 UMP[c]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
 
+
** in-silico_annotation
−
== Genes associated with this reaction  ==
+
***ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-12195]]
−
* [[Tiso_gene_1604]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***ec-number
−
***EC-NUMBER
+
* [[RXN-12196]]
−
** [[pantograph]]-[[esiliculosus]]
+
** in-silico_annotation
−
== Pathways  ==
+
***ec-number
−
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDOGLYCANSYN-PWY PEPTIDOGLYCANSYN-PWY]
+
* [[RXN0-5462]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** in-silico_annotation
−
== Reconstruction information  ==
+
***ec-number
−
* [[orthology]]:
+
== Pathways associated ==
−
** [[pantograph]]:
+
* [[PWY-7184]]
−
*** [[esiliculosus]]
+
* [[PWY-7198]]
−
* [[annotation]]:
+
* [[PWY-6545]]
−
** [[pathwaytools]]:
+
* [[PWY-7210]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3005}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28386 28386]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=7954}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
+
{{#set: centisome position=33.59419    }}
−
* UNIPROT:
+
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
−
** [http://www.uniprot.org/uniprot/Q55986 Q55986]
+
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
−
** [http://www.uniprot.org/uniprot/P45062 P45062]
+
−
** [http://www.uniprot.org/uniprot/Q03521 Q03521]
+
−
** [http://www.uniprot.org/uniprot/O25235 O25235]
+
−
** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
+
−
** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
+
−
** [http://www.uniprot.org/uniprot/P37585 P37585]
+
−
** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-2.7.8.13}}
+
−
{{#set: gene associated=Tiso_gene_1604}}
+
−
{{#set: in pathway=PEPTIDOGLYCANSYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:36, 18 March 2018

Gene Tiso_gene_9959

  • left end position:
    • 3005
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7954
  • centisome position:
    • 33.59419
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=URIDINE-NUCLEOSIDASE-RXN&oldid=25570"