Difference between revisions of "Tiso gene 5194"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O * inchi key: **...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
+
** InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
 +
* common name:
 +
** dCMP
 +
* molecular weight:
 +
** 305.183   
 
* Synonym(s):
 
* Synonym(s):
 +
** 2'-deoxycytidine 5'-monophosphate
 +
** deoxycytidylate
 +
** deoxycytidylic acid
 +
** deoxycytidine monophosphate
 +
** 2'-deoxycytidine 5'-phosphate
 +
** deoxycytidine-phosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[ATDCM]]
−
** 1 [[WATER]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P]][c] '''=>''' 1 [[DIHYDRO-NEO-PTERIN]][c] '''+''' 1 [[Pi]][c]
+
* [[RXN-7913]]
−
* With common name(s):
+
* [[DCMP-DEAMINASE-RXN]]
−
** 1 H2O[c] '''+''' 1 7,8-dihydroneopterin 3'-phosphate[c] '''=>''' 1 7,8-dihydroneopterin[c] '''+''' 1 phosphate[c]
+
* [[ATDCMf]]
−
 
+
== Reaction(s) known to produce the compound ==
−
== Genes associated with this reaction  ==
+
* [[DCTP-PYROPHOSPHATASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[DCYTPT]]
−
* [[Tiso_gene_6277]]
+
* [[RXN-14198]]
−
** [[pantograph]]-[[athaliana]]
+
* [[RXN-14187]]
−
** [[pantograph]]-[[esiliculosus]]
+
== Reaction(s) of unknown directionality ==
−
* [[Tiso_gene_2924]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8599]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7067]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1142]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13604]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_11387]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_15582]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_3667]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4112]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2747]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_3314]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4645]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16712]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17467]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_43]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16176]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12636]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8601]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14428]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_13729]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_10158]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_19075]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6144]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_15988]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_6767]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13847]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10288]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1799]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8600]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13784]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18343]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17804]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10760]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_277]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2019]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12514]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5713]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
+
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 1032-65-1
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25306 25306]
+
* METABOLIGHTS : MTBLC57566
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04621 R04621]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058169 7058169]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* HMDB : HMDB01202
−
{{#set: ec number=EC-3.6.1}}
+
* LIGAND-CPD:
−
{{#set: gene associated=Tiso_gene_6277|Tiso_gene_2924|Tiso_gene_8599|Tiso_gene_7067|Tiso_gene_1142|Tiso_gene_13604|Tiso_gene_11387|Tiso_gene_15582|Tiso_gene_3667|Tiso_gene_4112|Tiso_gene_2747|Tiso_gene_3314|Tiso_gene_4645|Tiso_gene_16712|Tiso_gene_17467|Tiso_gene_43|Tiso_gene_16176|Tiso_gene_12636|Tiso_gene_8601|Tiso_gene_14428|Tiso_gene_13729|Tiso_gene_10158|Tiso_gene_19075|Tiso_gene_6144|Tiso_gene_15988|Tiso_gene_6767|Tiso_gene_13847|Tiso_gene_10288|Tiso_gene_1799|Tiso_gene_8600|Tiso_gene_13784|Tiso_gene_18343|Tiso_gene_17804|Tiso_gene_10760|Tiso_gene_277|Tiso_gene_2019|Tiso_gene_12514|Tiso_gene_5713}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00239 C00239]
−
{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
+
* CHEMSPIDER:
−
{{#set: reconstruction category=orthology}}
+
** [http://www.chemspider.com/Chemical-Structure.5414501.html 5414501]
−
{{#set: reconstruction tool=pantograph}}
+
* CHEBI:
−
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57566 57566]
 +
* BIGG : dcmp
 +
{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O}}
 +
{{#set: inchi key=InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L}}
 +
{{#set: common name=dCMP}}
 +
{{#set: molecular weight=305.183    }}
 +
{{#set: common name=2'-deoxycytidine 5'-monophosphate|deoxycytidylate|deoxycytidylic acid|deoxycytidine monophosphate|2'-deoxycytidine 5'-phosphate|deoxycytidine-phosphate}}
 +
{{#set: consumed by=ATDCM|RXN-7913|DCMP-DEAMINASE-RXN|ATDCMf}}
 +
{{#set: produced by=DCTP-PYROPHOSPHATASE-RXN|DCYTPT|RXN-14198|RXN-14187}}

Revision as of 18:37, 18 March 2018

Metabolite DCMP

  • smiles:
    • C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
  • inchi key:
    • InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
  • common name:
    • dCMP
  • molecular weight:
    • 305.183
  • Synonym(s):
    • 2'-deoxycytidine 5'-monophosphate
    • deoxycytidylate
    • deoxycytidylic acid
    • deoxycytidine monophosphate
    • 2'-deoxycytidine 5'-phosphate
    • deoxycytidine-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 1032-65-1
  • METABOLIGHTS : MTBLC57566
  • PUBCHEM:
  • HMDB : HMDB01202
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : dcmp
"C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5194&oldid=25647"