Difference between revisions of "Tiso gene 4555"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.13-RXN 3.1.6.13-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** iduronate-2-sulfatase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == * direction: ** LEFT-TO-RIGHT * common name: ** tryptophan_synthase_(alpha_...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.13-RXN 3.1.6.13-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** iduronate-2-sulfatase
+
** tryptophan_synthase_(alpha_beta_chains)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.6.13 EC-3.1.6.13]
+
** [http://enzyme.expasy.org/EC/4.2.1.122 EC-4.2.1.122]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Heparan-sulfate-L-IdoA-2S]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Heparan-sulfate-L-iduronate]][c] '''+''' 1 [[SULFATE]][c]
+
** 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [heparan-sulfate]-2-O-sulfo-α-L-iduronate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 a [heparan sulfate]-α-L-iduronate[c] '''+''' 1 sulfate[c]
+
** 1 indole[c] '''+''' 1 L-serine[c] '''=>''' 1 L-tryptophan[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18595]]
+
* [[Tiso_gene_17207]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4604]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/Q08890 Q08890]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26434 26434]
−
** [http://www.uniprot.org/uniprot/P22304 P22304]
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=iduronate-2-sulfatase}}
+
{{#set: common name=tryptophan_synthase_(alpha_beta_chains)}}
−
{{#set: ec number=EC-3.1.6.13}}
+
{{#set: ec number=EC-4.2.1.122}}
−
{{#set: gene associated=Tiso_gene_18595}}
+
{{#set: gene associated=Tiso_gene_17207|Tiso_gene_4604}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=TRPSYN-PWY}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:37, 18 March 2018

Reaction RXN0-2382

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tryptophan_synthase_(alpha_beta_chains)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 indole[c] + 1 L-serine[c] => 1 L-tryptophan[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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