Difference between revisions of "Tiso gene 2166"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17382 CPD-17382] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9235 RXN-9235] == * direction: ** LEFT-TO-RIGHT * common name: ** ubiquinone_biosynthesis_methy...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17382 CPD-17382] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9235 RXN-9235] ==
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* smiles:
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* direction:
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** CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=DRQAURCKCKDINZ-KPYXOPPTSA-J
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* common name:
 
* common name:
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** (3R)-hydroxy-tetracosapentaenoyl-CoA
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** ubiquinone_biosynthesis_methyltransferase
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* molecular weight:
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* ec number:
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** 1120.05   
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** [http://enzyme.expasy.org/EC/2.1.1.201 EC-2.1.1.201]
 
* Synonym(s):
 
* Synonym(s):
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** (3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA
 
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** (3R)-hydroxy-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA
 
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** (3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16130]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-9869]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9871]][c]
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* [[RXN-16129]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 2-methoxy-6-all trans-decaprenyl-2-methoxy-1,4-benzoquinol[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_19352]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5872 PWY-5872]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5857 PWY-5857]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72551545 72551545]
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{{#set: common name=ubiquinone_biosynthesis_methyltransferase}}
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* CHEBI:
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{{#set: ec number=EC-2.1.1.201}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76462 76462]
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{{#set: gene associated=Tiso_gene_19352}}
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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{{#set: in pathway=PWY-5872|PWY-5857}}
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{{#set: inchi key=InChIKey=DRQAURCKCKDINZ-KPYXOPPTSA-J}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=(3R)-hydroxy-tetracosapentaenoyl-CoA}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: molecular weight=1120.05    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=(3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA|(3R)-hydroxy-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA|(3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA}}
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{{#set: consumed by=RXN-16130}}
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{{#set: produced by=RXN-16129}}
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Revision as of 19:37, 18 March 2018

Reaction RXN-9235

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ubiquinone_biosynthesis_methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 S-adenosyl-L-methionine[c] + 1 2-methoxy-6-all trans-decaprenyl-2-methoxy-1,4-benzoquinol[c] => 1 H+[c] + 1 S-adenosyl-L-homocysteine[c] + 1 6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5872, ubiquinol-10 biosynthesis (eukaryotic): PWY-5872
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5857, ubiquinol-10 biosynthesis (prokaryotic): PWY-5857
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2166&oldid=25707"