Difference between revisions of "CPD-469"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8025 RXN-8025] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** β-carotene 3,3′-mon...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7694 RXN-7694] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8025 RXN-8025] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7694 RXN-7694] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** polyketide_synthase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** β-carotene 3,3′-monooxygenase
 
−
** CrtZ
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-129]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CPD-7409]][c]
+
** 1 [[METHYLBUT-CPD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-7033]][c] '''+''' 1 [[NAD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 oxygen[c] '''+''' 1 all-trans-β-carotene[c] '''=>''' 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 β-cryptoxanthin[c]
+
** 1 2-methylbutanal[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 2-methylbutanol[c] '''+''' 1 NAD+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10837]]
+
* [[Tiso_gene_6562]]
−
** [[pantograph]]-[[synechocystis]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5424]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6563]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5425]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7649]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
+
* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30326 30326]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07558 R07558]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=β-carotene 3,3′-monooxygenase|CrtZ}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: gene associated=Tiso_gene_10837}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWY-5288|PWY-5944|PWY-7638}}
+
{{#set: ec number=EC-1.1.1.1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_5424|Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_7649}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-5078}}
−
{{#set: reconstruction source=synechocystis}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:38, 18 March 2018

Reaction RXN-7694

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methylbutanal[c] + 1 NADH[c] + 1 H+[c] => 1 2-methylbutanol[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5078, L-isoleucine degradation II: PWY-5078
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-469&oldid=25816"