Difference between revisions of "Tiso gene 13202"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINALDOL-RXN H2NEOPTERINALDOL-RXN] == * direction: ** REVERSIBLE * common name: ** dihydron...")
(Created page with "Category:Gene == Gene Tiso_gene_9613 == * left end position: ** 9624 * transcription direction: ** POSITIVE * right end position: ** 12073 * centisome position: ** 78.1168...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINALDOL-RXN H2NEOPTERINALDOL-RXN] ==
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== Gene Tiso_gene_9613 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 9624
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* common name:
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* transcription direction:
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** dihydroneopterin_aldolase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.2.25 EC-4.1.2.25]
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** 12073
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* centisome position:
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** 78.11688   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[1.14.13.8-RXN]]
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** 1 [[DIHYDRO-NEO-PTERIN]][c] '''<=>''' 1 [[GLYCOLALDEHYDE]][c] '''+''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 7,8-dihydroneopterin[c] '''<=>''' 1 glycolaldehyde[c] '''+''' 1 6-(hydroxymethyl)-7,8-dihydropterin[c]
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** [[pantograph]]-[[esiliculosus]]
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* [[CYCLOHEXANONE-MONOOXYGENASE-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_2577]]
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* [[RXN-5961]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***EC-NUMBER
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* [[RXN66-81]]
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* [[Tiso_gene_2576]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
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* [[CYCLOHEXANOL-OXIDATION-PWY]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5947]]
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* [[PWY-6148]], tetrahydromethanopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6148 PWY-6148]
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* [[PWY66-201]]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=9624}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10540 10540]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=12073}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
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{{#set: centisome position=78.11688    }}
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* UNIPROT:
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{{#set: reaction associated=1.14.13.8-RXN|CYCLOHEXANONE-MONOOXYGENASE-RXN|RXN-5961|RXN66-81}}
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** [http://www.uniprot.org/uniprot/P22291 P22291]
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{{#set: pathway associated=CYCLOHEXANOL-OXIDATION-PWY|PWY-5947|PWY66-201}}
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** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
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** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
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** [http://www.uniprot.org/uniprot/P28823 P28823]
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** [http://www.uniprot.org/uniprot/P29251 P29251]
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** [http://www.uniprot.org/uniprot/P53848 P53848]
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** [http://www.uniprot.org/uniprot/O75013 O75013]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=dihydroneopterin_aldolase}}
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{{#set: ec number=EC-4.1.2.25}}
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{{#set: gene associated=Tiso_gene_2577|Tiso_gene_2576}}
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{{#set: in pathway=PWY-7539|PWY-6148|PWY-6797|PWY-6147}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:38, 18 March 2018

Gene Tiso_gene_9613

  • left end position:
    • 9624
  • transcription direction:
    • POSITIVE
  • right end position:
    • 12073
  • centisome position:
    • 78.11688
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13202&oldid=25838"