Difference between revisions of "RXN0-6705"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALPMUT-RXN GALPMUT-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** udp-galactopyranose...")
(Created page with "Category:Gene == Gene Tiso_gene_5035 == * left end position: ** 10277 * transcription direction: ** POSITIVE * right end position: ** 13522 * centisome position: ** 73.506...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALPMUT-RXN GALPMUT-RXN] ==
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== Gene Tiso_gene_5035 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 10277
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** udp-galactopyranose_mutase
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* right end position:
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* ec number:
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** 13522
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** [http://enzyme.expasy.org/EC/5.4.99.9 EC-5.4.99.9]
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* centisome position:
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** 73.506905   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[5.99.1.2-RXN]]
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** 1 [[CPD-14553]][c] '''<=>''' 1 [[UDP-D-GALACTO-14-FURANOSE]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 UDP-&alpha;-D-galactose[c] '''<=>''' 1 UDP-&alpha;-D-galactofuranose[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3775]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15395]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[OANTIGEN-PWY]], O-antigen building blocks biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397]
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** '''2''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7622]], UDP-galactofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7622 PWY-7622]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=10277}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24132 24132]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=13522}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00505 R00505]
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{{#set: centisome position=73.506905    }}
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* UNIPROT:
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{{#set: reaction associated=5.99.1.2-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PML8 Q9PML8]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: common name=udp-galactopyranose_mutase}}
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{{#set: ec number=EC-5.4.99.9}}
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{{#set: gene associated=Tiso_gene_3775|Tiso_gene_15395}}
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{{#set: in pathway=OANTIGEN-PWY|PWY-6397|PWY-7328|PWY-7622}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:38, 18 March 2018

Gene Tiso_gene_5035

  • left end position:
    • 10277
  • transcription direction:
    • POSITIVE
  • right end position:
    • 13522
  • centisome position:
    • 73.506905
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-6705&oldid=25853"