Difference between revisions of "RXN-1225"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Protein-formylglycine Protein-formylglycine] == * common name: ** a [sulfatase]-3-oxo-L-alanine...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-retinyl-pal...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Protein-formylglycine Protein-formylglycine] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a [sulfatase]-3-oxo-L-alanine
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** all-trans-retinyl-palmitate hydrolase
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** ORF
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** alpha_beta_hydrolase_fold_protein
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** alpha_beta_hydrolase
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** serine_esterase
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** sialate_o-acetylesterase-like_protein
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** lysophospholipase
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** protein_chloroplastic
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** a [sulfatase]-Cα-formylglycine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-16226]]
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** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13524]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 all-trans-retinol[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1537]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4650]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12686]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17029]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11351]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1538]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16518]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4606]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2556]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9429]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a [sulfatase]-3-oxo-L-alanine}}
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* RHEA:
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{{#set: common name=a [sulfatase]-Cα-formylglycine}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13933 13933]
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{{#set: produced by=RXN-16226}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02368 R02368]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=all-trans-retinyl-palmitate hydrolase}}
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{{#set: common name=ORF}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=serine_esterase}}
 +
{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_1537|Tiso_gene_4650|Tiso_gene_12686|Tiso_gene_10066|Tiso_gene_17029|Tiso_gene_11351|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_4606|Tiso_gene_1922|Tiso_gene_2556|Tiso_gene_9429}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:38, 18 March 2018

Reaction 3.1.1.64-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • all-trans-retinyl-palmitate hydrolase
    • ORF
    • alpha_beta_hydrolase_fold_protein
    • alpha_beta_hydrolase
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinyl palmitate[c] + 1 H2O[c] => 1 all-trans-retinol[c] + 1 palmitate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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